Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00325 AGAGAGAGAGAGAAAGAGGGTGTGGTGGTGATTCCAGATGCTGTGGAAATGGGGAAAAGTGAGCAACAGCATGTGCAGGAAGAAGGGCAGAGTGGTGGGAGTGAGGTTGAGGCTCCACTCTGTTGGGTCCTTCTTCGACCATTCAGTTTCAAGTGTCTGTTCCTTCTCCTTCTCAGTTTGTCGGCTTTGATTTCTTCACTCTTTTGGGTTCTTCCCAGGCACACCGTTACTTATAGTTTTGATGCAAGAGATGTAATCAAGCAAAATGGTCAGTCTCAATTGCCTTCCCTTTCCTTCCCCACAATTGCCTTCTTTGTGTCATCTGGGGGTACTGAGTGGTTATCAGGAATTCAGGCTATGTATGTATTGCCTATATTGGCTCAAGAATTTGAAATGCGGATTGCTGCTGTTCAGACATCCTTCAGACTGGAAAAACCAGTTTCACAGCTTATTCCATATATTGAAACGTTAGAATATGATATATATGGCGAAATAGCTCTACCAAATACAAAGGTGGCTATCCTGTCCATGCACCAAAGTATTACACCTAACTGTACTGACGTGGTGTTTGGTGTTCTCTGTGATCCGATGAAAGGTTCAATAAATCCAGTGTCCTTGAGTGTGCTGAGATCATCTTTGATTGAACTGTTTCTCAAGCAATCCAACCTGACTTTGACACCATCAATATTTGGGAGTGCATCGATATTTGAAATCTTGAAGTTTCCTGGAGGATTAACTGTAATACCACCGTACTCTGCTTACATTTGGCAGATGCCTGAGGTGCTGTTTAATTTTACTCTTAACAATTCAATATCTGAAGTGCTGGAGAATTTTGATGACTTCAAGTATGAATTGAAGTCTGGATTGCATCTAAACTCTGACGAGAATGTGTACGTGCAAATAACAAATGAAAATGGCTCAACGACAGCTCCTCCAGTGGTAGTCCAGGCTTCAGTCATGCCAGGCTATGGTAGCCTCTTGCCCCAAAGATTAAAACAATTAGCTCAAACAATAACAGGTTCTGCTGGCAAAAATCTTGGCCTTAATAACTCAGTTTTTGGCAGAGTTAAAGAAGTCAGACTATCTACTTTCTTGAAGAAAAAACTTCATGCATCCTCACCTTCTCCTTCTCCAGCTCCATCCCCACAGTTAAGTGATCACTCTGAGCCATCAACTTCACCACATCCTGCTAGTCCGTACTCTCCAATATCACCAGCAACTGCTGAGCCATCTCCCTGTTTTGACTGTGAAGTATCTTCACCTGCACCATCTATTGTGCCTGAGCATCCTCCTGATCCTTGTCCATATAGTGGCTTCGTACATTATCCCATCTCTTCACCAAAGTCTTATTCTAATCCATCCATCTCTTCACCTTCTGCTGCCCCCACCTCAAATTCTGCCACTACTGAAGAAGCTTCTGATCTGTCCCATGGATCCAAGCGTCGGAAGGGTGAAGAAACATCTAAAAAATTGGTGTCTCAGATGCATGCTCCATCCTCTATATCATCAGCGGGTGGTGATTTCCGTGGGGAAATCTTGCTAATGGGATTTTGTATGCTGTTAATTGCTTTTTGTTTCTGTCAATGA 1587 0.4304 REREKEGVVVIPDAVEMGKSEQQHVQEEGQSGGSEVEAPLCWVLLRPFSFKCLFLLLLSLSALISSLFWVLPRHTVTYSFDARDVIKQNGQSQLPSLSFPTIAFFVSSGGTEWLSGIQAMYVLPILAQEFEMRIAAVQTSFRLEKPVSQLIPYIETLEYDIYGEIALPNTKVAILSMHQSITPNCTDVVFGVLCDPMKGSINPVSLSVLRSSLIELFLKQSNLTLTPSIFGSASIFEILKFPGGLTVIPPYSAYIWQMPEVLFNFTLNNSISEVLENFDDFKYELKSGLHLNSDENVYVQITNENGSTTAPPVVVQASVMPGYGSLLPQRLKQLAQTITGSAGKNLGLNNSVFGRVKEVRLSTFLKKKLHASSPSPSPAPSPQLSDHSEPSTSPHPASPYSPISPATAEPSPCFDCEVSSPAPSIVPEHPPDPCPYSGFVHYPISSPKSYSNPSISSPSAAPTSNSATTEEASDLSHGSKRRKGEETSKKLVSQMHAPSSISSAGGDFRGEILLMGFCMLLIAFCFCQ 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00325 528 MobiDBLite consensus disorder prediction 474 490 - -
Vimu2g00325 528 MobiDBLite consensus disorder prediction 451 496 - -
Vimu2g00325 528 PANTHER F20B24.21 17 504 - -
Vimu2g00325 528 MobiDBLite consensus disorder prediction 369 406 - -
Vimu2g00325 528 MobiDBLite consensus disorder prediction 451 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00325 Vimu-Chr2 1793775 1798088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00325 131 365 C3H Transcription Factor Family AT3G10810 45.763 6.89e-55 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00325 - - ccaj:109803451 651.358