Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00185 ATGCGAAGCAGAAAGAACGGAATGCCGTGCCTTGTTCCCATTTGGGGGAAAGATGAATTACTTGGTTCATCCTGTGAGGTGGAATCTGGGGTTTTCCCGCCCGAACCCCCTGCGATGGAGATGTCATCACGAATGAATGAGGTGGAACATGTTTCGCCTGCAGATGGCGTCCCTGAGCTGGCCAAAGAGTTGGAGCGTATGGTTGATAGATACAGCAGCGGGAGGATCAATTTTGTTTGGGATGATGAGGAGTCAGAAGATGAGGACAAATCCCTCTTGCAATTCCTAGACATGGTGGATCGCATCTCCGCTGCTTCGTCTTCCTTATCATCTTCTTCTTCCTCCTCTTCTGGTGTGATTGCTTACCAGGAGGAGTTGGACCAGATCGCCTTCGTCCTAGAAAAAGCAATGTCCCTACTAGAGAAACATCTTTCTCATCTTCTACACGACGACCCCAAATCTAAAACACCCAACAAATCCTTCTCCTTTAATTCTCCTTCATACCTTTCTTCTGTTCCCGAGTCTCCCTCCCCTAGACCACCACAGCAGGATCACCACACCCAAGACCCCTTTAATTTCTCTCCGCAAAAGATTTCTACTTTGAACAAGATTGCCACTGCCATGATCTCAGCCGGCTACCACATCGAGTGCTACTTGGTTTTTGCTAGTTTCAGGCGAACTGCTTTCAGAACTACACTCAGAACATTTGGATTCGGGAACACCAGGATGGAAGATTTGTGTAAAATGTCATGGGAATCGCTTGAAGCTGAAATTGCAACGTGGAATCAAGTGGTTTGGCACTGCACCACCGTGCTTTTCAAGTCTGAAAGAAAACTTTATGAATCCATCTTCCCCGATCATCCCTCTATTTCTCAAAACTTGTTCTGCGATCTTGCACGACAAGTCATCGTCCATTTGCTCAACTTTGCACAGTGTGCTGTTCTAACAAAATGGACCACAGAGAAACTTTTCAAATTTCTAGATATGTACGAGACCCTGAGGGAAGACGTTGTCGGGGGTTCCTATCTGGAGTCGGGAGCTAAGGAGCTGGCGTACGAGGCAGACACCGCAAGGGACATGATAGTAGAGGCTATTATGGCCATGTTTTGTGATCTGAAGAACTCGATCAAGAACGACAACGAAAGGATTCCTGTTCCGAACGGTGCAGTGCACCCCTTGACTCGGTATGTAATGAACTATCTAAAATATGCATGCGAGTACAAGGATACGTTGGAGGAAGTGTTTGAGCAAGGAGAAAGGATAAATGAGAAGGAGGTGAACGAAGTGGAAGATGTAGAGAAGCGGAAGAATTCGGGTTTTGCAGTGCAGTTGATGAGCATAATGGATCTTTTGGATGCAAATGTGGAAAGGAAATCACAGCTGTACAGGGACGATGCCCTGAGGTATTTTTTTCTGATGAACAACGGGAGATACGTAGTGCAGAAGGTGAAAGGGTGTGAGGAGCTTCATGAACTGATGGGTGACAACTGGTGCAGGAGGAGACAGTCGGGTCTGAGGTTGTACCACAAGTGTTATCAGAGGGAAACATGGACTAAGGTGCTGCAGTGCCTAAAGCCGGAGGGGCTGCAGCAGGAGACTGGGAACAAGGTCTCCAAACAGCTCGTGAAGGAAAGATTCAAATACTTCAATCGGATGTTTGAAGAGATACACAAGTGTCAGAGTTGTTGGATGGTTAGCGATCAGCAACTGCAGTCGGAACTCAGAGTTTCCATCTCCTCTTTGGTCATCCCCGCCTACCGCTCCTTCGTTGGAAGATTCAAACAACATCTTAAATCAACCAGGCACATCGACAAGTATATCAAGTACCACCCAGACGACATTGAGCTTTTGATTGATGATTTCTTTGCCGGTAATGCTGCCTCCATGCCTCGAAGGAGGTCATGA 1905 0.4698 MRSRKNGMPCLVPIWGKDELLGSSCEVESGVFPPEPPAMEMSSRMNEVEHVSPADGVPELAKELERMVDRYSSGRINFVWDDEESEDEDKSLLQFLDMVDRISAASSSLSSSSSSSSGVIAYQEELDQIAFVLEKAMSLLEKHLSHLLHDDPKSKTPNKSFSFNSPSYLSSVPESPSPRPPQQDHHTQDPFNFSPQKISTLNKIATAMISAGYHIECYLVFASFRRTAFRTTLRTFGFGNTRMEDLCKMSWESLEAEIATWNQVVWHCTTVLFKSERKLYESIFPDHPSISQNLFCDLARQVIVHLLNFAQCAVLTKWTTEKLFKFLDMYETLREDVVGGSYLESGAKELAYEADTARDMIVEAIMAMFCDLKNSIKNDNERIPVPNGAVHPLTRYVMNYLKYACEYKDTLEEVFEQGERINEKEVNEVEDVEKRKNSGFAVQLMSIMDLLDANVERKSQLYRDDALRYFFLMNNGRYVVQKVKGCEELHELMGDNWCRRRQSGLRLYHKCYQRETWTKVLQCLKPEGLQQETGNKVSKQLVKERFKYFNRMFEEIHKCQSCWMVSDQQLQSELRVSISSLVIPAYRSFVGRFKQHLKSTRHIDKYIKYHPDDIELLIDDFFAGNAASMPRRRS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00185 634 MobiDBLite consensus disorder prediction 166 193 - -
Vimu2g00185 634 SUPERFAMILY Cullin repeat-like 87 622 IPR016159 -
Vimu2g00185 634 Gene3D Exocyst complex component Exo70 81 632 - -
Vimu2g00185 634 Pfam Exo70 exocyst complex subunit 261 619 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vimu2g00185 634 PANTHER EXOCYST COMPLEX PROTEIN EXO70 63 623 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00185 Vimu-Chr2 1097777 1099845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00185 41 633 EXO70 exocyst subunit family AT5G13150 46.474 1.56e-175 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00185 K07195 - pvu:PHAVU_007G000900g 937.562