Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00152 ATGAAACGTACGCGCAGAGGCAATGCCGATGCCGATGAGAATGCCGACGGCGAGGGGGTTTCCAAGAAGAAAGCGGTGCGCGAGCAGAACCCCGCCACACGCAGGGTCATACGCTCCCAGTTCCTCAAACTCAAGACTCTCATCAGCGAGAAAAAAGATGATTTGATGAACACGGAGTCCGACAAATTCGACAACCTTTTGGACGAGTTCGACAAGTTACACGACCAAGTTGAGAAGCCAAGAGAGCAAGTTGCAGATGCAGAGGCACTGTTGGATCTGACGCGCACTGTCGTAGGATCTGTTAGGAGTTTGGCGAACGAGGGTGTCACCCCTTCACAATTTGTTTCCTCTTTGCTCATACGCTATGGCCAAGGTCAAGGCCAAGATTCAATCGATTGGCAGAAACTTGGCATTGCGGTGTCCCCAATATTCCTCTCCGTTCATGGCTCTTCTACCATGCTTGGACCTATGGACAACGAAATCAAGAAACGAAAAATCGGAGTGCGCAAACAACGTGATGCTCGCCCAGTCGCAACTACTAGACCTGAACAGCTTAACGATGCTGGTGCGGTGGAGAAAACTGATACTGACAAAAACATGGCAACGATGTTTAACATCTTGAGGAGGACAAAACGTGTCCGACTTGAAAATTTAATTATCAACAGAAAGTCTTTTGCTCAGACCGTGGAAAATTTGTTTTCTCTGTCATTCCTTGTTAAAGATGGTCGTGCTGAGATCAGTCTCGATGAAAATCGTTTGCACTATGTTTCTCCTAAAAATGCTCCAGCTGCTAACTTAGTATCATCAAAAGAAGTTTCTTATAGTCATTTTGTATTCAGATATGATTACCAAGATTGGAAGCTTATGAAAGATGTTGTGCCGGAAGGGGAAGAGTTGATGCCACATCGGGTTCAATGTGCTACCGTTGCTAAACCTCAGGAAAGGATGTGTGTGGACGATTCCCAACCTGCTTTGGCTTTAACACCTATCAGGAAGCTATCGCGGAATCGAGGACTGGTTGTACAGGAGGAAAGTGTTGTAGAAGAAACTCCTGAATGCGAAGAAGAAAATGTTTCCAGAGAAGGGGCTATTCGGAGGTGTAAGCGTAAACTTCATGAAGAAATAGCACATTAG 1134 0.4594 MKRTRRGNADADENADGEGVSKKKAVREQNPATRRVIRSQFLKLKTLISEKKDDLMNTESDKFDNLLDEFDKLHDQVEKPREQVADAEALLDLTRTVVGSVRSLANEGVTPSQFVSSLLIRYGQGQGQDSIDWQKLGIAVSPIFLSVHGSSTMLGPMDNEIKKRKIGVRKQRDARPVATTRPEQLNDAGAVEKTDTDKNMATMFNILRRTKRVRLENLIINRKSFAQTVENLFSLSFLVKDGRAEISLDENRLHYVSPKNAPAANLVSSKEVSYSHFVFRYDYQDWKLMKDVVPEGEELMPHRVQCATVAKPQERMCVDDSQPALALTPIRKLSRNRGLVVQEESVVEETPECEEENVSREGAIRRCKRKLHEEIAH 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00152 377 Pfam Nse4 C-terminal 213 299 IPR014854 -
Vimu2g00152 377 MobiDBLite consensus disorder prediction 1 31 - -
Vimu2g00152 377 PANTHER UNCHARACTERIZED 3 356 IPR027786 GO:0005634|GO:0006281|GO:0030915
Vimu2g00152 377 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00152 Vimu-Chr2 907847 909980 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00152 34 371 Non-SMC Element family AT1G51130 51.724 3.70e-120 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00152 K22825 - gmx:100792117 556.599