Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00066 ATGCTATTTCTGCATATATCGCGAACTGAGTGGGATTCCCCTGGTTTCTGGTTTCTTCTTTTTTCCTCTGTTTCTCTTACATTTGATCGTCCATCGGAAATGGCTATTGAGGTTGCTGTCAAGGCTGCTGCTGGTGCTCCAGATGTTCTCGGAGACTGTCCATTTTGCCAAAGGGTCCTCTTAACTTTAGAGGAGAAGAAGATTCCCTACAAGCTCCACCTAATTGATCTCAGTAACAAACCCGAATGGTTTTTGGGTGTGAATCCTGAAGGAAAGGTGCCAGTGGCTCTTTTTGATGGAAAATGGGTGCCTGATTCTGATGTAATTGTGGGGATTCTCCAAGAAAAGTACCCAGAAATCTCTCTCGTTACTCCTCCTGAATATGCCACTGTGGGATCAAAGATATTTGGGTCTTTTGTGAGTTTTCTTAAGAGCAAGGATCCGAATGATGGAACAGAGCAAGCATTGCTGGCTGAATTGAGTGCTCTGGATGAACATCTTAAGGCCCATGGTCCATATATTGCTGGGGAGAAAGTCACTGCTGTTGACCTGAGTTTGGCACCAAAACTGTACCATCTTGTGGTCGTACTTGGCCACTTCAAGAAATGGAGTGTTCCAGAAAGTTTGTCACATGTCCACATCTACACTGAGCTGCTCTTCTCCCGTGAGTCATTTGAGAAAACCAAGCCTCCAAAGGAAGAGTTTGTCATTGCCGGATGGGCACCAAAAGTGAATGCTTGA 741 0.4507 MLFLHISRTEWDSPGFWFLLFSSVSLTFDRPSEMAIEVAVKAAAGAPDVLGDCPFCQRVLLTLEEKKIPYKLHLIDLSNKPEWFLGVNPEGKVPVALFDGKWVPDSDVIVGILQEKYPEISLVTPPEYATVGSKIFGSFVSFLKSKDPNDGTEQALLAELSALDEHLKAHGPYIAGEKVTAVDLSLAPKLYHLVVVLGHFKKWSVPESLSHVHIYTELLFSRESFEKTKPPKEEFVIAGWAPKVNA 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00066 246 CDD GST_C_DHAR 122 243 - -
Vimu2g00066 246 Pfam Glutathione S-transferase, C-terminal domain 153 211 - -
Vimu2g00066 246 SFLD Main (cytGST) 52 217 - -
Vimu2g00066 246 FunFam Glutathione S-transferase DHAR3 chloroplastic 34 122 - -
Vimu2g00066 246 CDD GST_N_family 53 110 - -
Vimu2g00066 246 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 43 121 IPR004045 -
Vimu2g00066 246 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 34 243 IPR044627 GO:0033355|GO:0045174|GO:0098869
Vimu2g00066 246 Gene3D - 123 246 - -
Vimu2g00066 246 Gene3D Glutaredoxin 34 122 - -
Vimu2g00066 246 FunFam Glutathione S-transferase DHAR3, chloroplastic 123 246 - -
Vimu2g00066 246 Pfam Glutathione S-transferase, N-terminal domain 52 119 IPR004045 -
Vimu2g00066 246 SUPERFAMILY Thioredoxin-like 52 119 IPR036249 -
Vimu2g00066 246 SFLD Glutathione Transferase (cytosolic) 52 217 IPR040079 -
Vimu2g00066 246 SUPERFAMILY GST C-terminal domain-like 128 236 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00066 Vimu-Chr2 361008 364296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00066 34 246 Glutathione S-transferase Gene Family AT1G75270 71.963 5.58e-111 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00066 K21888 - gmx:100306061 385.185