LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu2g00032	ATGGGTGAGTCTATATATATCAGTTCGTCAGATGATGATGAGTTGGAGGAGATAGATGTTCAAAAGAGAACTCTTCCGCAATGGGCAACAACTTTTGAAAGGAGTTCAGACTATGGTAGGCGGAATAATTCTTCAAGAGGGTCAAATAGTTCAAACCTAAGTTCTTCTAGTGTGTATAATCATTCACAAATCAAACCTCATACACTACCTGTGTCCAGTACCAATGCACCGAACCACAGAATTGCACGAAGAGATGAACCTTCCTACCATGATCAGAAGGGAAACACAAGTCAGCAACAAACAGTTAATTTCGAAATTTCAAAGTCTCATGAGAAAATGTCATCTCAGCAAGCTTTCAAGAGGACCCTTCCTTCAACTCTTCAGCCTTCTGCAACAAGGGCTCTTCCTTCTCCTTTATTTGTGTCAGACATCAGATCAAGCAACTTAAAAGATAACCCAGGCAGTAGTCATCTTCATGATGCATATAAGAATCATCGCCAGGGAGTAGGGCCTAGCATGTCCGGTGACAGGGGCTACATTCGTGACAGTCTTATCAGGAGCCATGACGAAGGTCATTTATTGTATCAAAATAGTGGGAATAGGATTCTTCCACCATCTTTGGTTCTTGGAAAGGCCATAACTCCACACTTTGCAATTTCTAGTGAATCTGCATATCATTCTGGAATAGGTGATGAAAGGTCTGCTGAAAATGACGAGAGACTTATTTATGAGGCAGCATTACAGGATATCAAAAATTGCATTGGCTTGGATGCTTCAAAGGGAAACCAAGAGTTTGCATTGCTTGGGGGGGATTTTGGCTGA	822	0.4161	MGESIYISSSDDDELEEIDVQKRTLPQWATTFERSSDYGRRNNSSRGSNSSNLSSSSVYNHSQIKPHTLPVSSTNAPNHRIARRDEPSYHDQKGNTSQQQTVNFEISKSHEKMSSQQAFKRTLPSTLQPSATRALPSPLFVSDIRSSNLKDNPGSSHLHDAYKNHRQGVGPSMSGDRGYIRDSLIRSHDEGHLLYQNSGNRILPPSLVLGKAITPHFAISSESAYHSGIGDERSAENDERLIYEAALQDIKNCIGLDASKGNQEFALLGGDFG	273

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu2g00032	273	MobiDBLite	consensus disorder prediction	24	78	-	-
	Vimu2g00032	273	MobiDBLite	consensus disorder prediction	153	176	-	-
	Vimu2g00032	273	MobiDBLite	consensus disorder prediction	1	79	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu2g00032	Vimu-Chr2	156080	169732	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu2g00032	1	250	RAD5 or RAD16-like Gene Family	AT1G50410	28.358	1.68e-13	68.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu2g00032	-		-	gmx:100795142	303.523