Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00031 ATGGGAGAGATTAAAGTGCTTGGGTTTTGGTCTAGCCCTTTCGTTCATAGGGTGATATGGGCTCTGAAGTTGAAGGGCATTAGTTATGAGTACATAGAGATTGACAGACACAACAAAGGTGAGCTACTTCTGCAATCCAATCCAGTTTACAAGAAAGTCCCAGTGCTCATTCATGGAGGCAGAGCAATTCCAGAGTCTATGGTCATCCTTGAATACATCGAAGACACATGGCCACACAACCCATTGCTGCCAAAAGACAACCATCAGAAAGCCTTGGCTCGCTTTTGGATTAAATTTGGAGAAGATTCGATCGCCTCTATCACTGATCTGTTTCTCCGACCTCAAAAAGATGAACAAGAAAGAGCAAGTGCATGGAAAAGAGCACAAGAAACTATATCAGTAATCGAAGAGCAAGGTCTAGGGGAGAAGAAATTCTTTGGAGGCAACAACATTGGAATGGTGGACATAGCATATGGATGCCTAAGCCATTGGTTGGAAGGCTTGGAGGAAATTGTTGGGATGAAATTAATTGAACCCAACAAATTTCCTCAGTTGCATGCGTGGACACAAAACTTCAAACAAGTTCCTGTCATCAAAGAAAACCTTCCGGATTATGGGAAACTGTTGATACATCTTCAATGGCGCAGGCAGCAATAA 657 0.4277 MGEIKVLGFWSSPFVHRVIWALKLKGISYEYIEIDRHNKGELLLQSNPVYKKVPVLIHGGRAIPESMVILEYIEDTWPHNPLLPKDNHQKALARFWIKFGEDSIASITDLFLRPQKDEQERASAWKRAQETISVIEEQGLGEKKFFGGNNIGMVDIAYGCLSHWLEGLEEIVGMKLIEPNKFPQLHAWTQNFKQVPVIKENLPDYGKLLIHLQWRRQQ 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00031 218 SUPERFAMILY GST C-terminal domain-like 75 217 IPR036282 -
Vimu2g00031 218 CDD GST_N_Tau 4 77 - -
Vimu2g00031 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 204 IPR045073 -
Vimu2g00031 218 Gene3D Glutaredoxin 1 82 - -
Vimu2g00031 218 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Vimu2g00031 218 Pfam Glutathione S-transferase, C-terminal domain 110 193 IPR004046 -
Vimu2g00031 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 218 IPR010987 -
Vimu2g00031 218 Gene3D - 83 218 - -
Vimu2g00031 218 CDD GST_C_Tau 88 215 IPR045074 GO:0004364|GO:0006749
Vimu2g00031 218 FunFam Putative glutathione S-transferase 1 83 - -
Vimu2g00031 218 SFLD Main (cytGST) 2 217 - -
Vimu2g00031 218 Pfam Glutathione S-transferase, N-terminal domain 4 74 IPR004045 -
Vimu2g00031 218 SUPERFAMILY Thioredoxin-like 4 102 IPR036249 -
Vimu2g00031 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vimu2g00031 218 FunFam Tau class glutathione S-transferase 83 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00031 Vimu-Chr2 145903 146642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00031 3 218 Glutathione S-transferase Gene Family AT2G29420 42.130 4.13e-57 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00031 K00799 - gmx:547586 402.905