Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03187 ATGGTTCTGTCTGTTGTTCTCTCTCTACCTTGTATCGTTATCTTCATCTTCTTCTTTGTTCTCTCGCAAAGAAGAAAACTTGCAGCACCACCAGGTCCTCCATCTCTTCCTCTCATCGGCAACCTTCACCAACTCCATCACTCATCCCCACATCGCTCCCTATGGCAACTCGCCAAACGCTACGGCCCTCTCATGTCGCTGCGTCTCGCCTCCGTACAAACCCTAGTCGTTTCCTCCGCCCAAGTCGCCAAAGAAATCCTCAAAACCCATGACCTCAACTTCGCAACCAGGCCCGCCTTCGTCGGCCTCAGAAAGCTCTCTTACAACGGGCTCGACCTGGGCTTCGCGCCCTACGGCCCATGCTGGAGAGAATTGAAGAAACTCTGCATGATCCACCTCTTCAGCGCTCACCGCGTTCAGTCCTTCCGCTCCGTTCGAGAAGACGAGGTAACCCAAATGCTTCGGAAGCTGTCGGAGCAAGAAGCTTCGGGCACCGTCGTGAACCTAACCGAAATACTTATGTCTTTCTCGAGTTCTCTGATATGCAGAATCGCGTTCGGGAAAAAAAAGTACGTCGACGAGTACGAGGAAGTTGTAGGGAAGGGAAAGCGGAGGAGCCGGTTGCAGGTTATGCTGAACGAGGCGCAGGCGTTGCTGACTGAGTTTTTCTTTTCGGATTATTTTCCGTTGCTGGGTTGGGTTGATTGGTTGACGGGTAAAAGGCAGCGGCTGGAGAAAACGTTCAAGGAGTTGGATGCGTTCTACGAACGAGTCATCTTGGAGCACATGGATTCTGCCATGGCTAAAGATGGTGATGGTGAGAAAGAAGTGGAAGATATCATCGATATCTTTCTTCAGCTTCTTCGTGATCGTTCTCTCTCGTTTCATTTCACTCTTGACCACATAAAAGCCGTGCTCATGGTAACTTCATCGTTCAACCTTCTCTTTCATTGCATAGAATATTATTCCGACCCTCCTTCGGCGACAATAGTTTGGGCGATGACGGCACTGTTGAAGAATGGTGAAGTAATGAGAAAGGTTCAAGAAGAAGTGAGAAGTTTATTCGGTGAGAAAGATTTCATAAACGAAGACGACGTTGAAAGGCTTCCATATCTGAAAGCGGTGGTGAAGGAGACGTTGAGACTGTTCCCACCGTCGCCACTTCTGTTGCCGAGGGTAGCGATAGAGCGTTGCAGCATTGAGGGGTACGAGATTGAAGCCAAAACCTTGGTGTACGTTAACGCCTGGGCTATAGCGACGGACCCTGAGAACTGGGAAAAGCCCCAAGAGTTTTGTCCCGAGAGGTTTCTCGGGAGTGAGATGGAGTTGAAGGGGAAGGAGTTTGAGGTGCTGCCGTTTGGGAGTGGCCGGAGAATGTGTCCGGCGAAGCACATGGGAATGGTGAACGTTGAGCTGTCTCTTGCGAATCTGGTCCACACTTTTGACTGGGAAGTGGACCCAGGGAGTGACAGAGAGGAGATGTTAGGCACAGAAGTGAAACCAGGAGTAACGATGCACAAGAAAACTGACCTTTACCTTGTTCCCAAGAAGAGGACAACCTAG 1563 0.5029 MVLSVVLSLPCIVIFIFFFVLSQRRKLAAPPGPPSLPLIGNLHQLHHSSPHRSLWQLAKRYGPLMSLRLASVQTLVVSSAQVAKEILKTHDLNFATRPAFVGLRKLSYNGLDLGFAPYGPCWRELKKLCMIHLFSAHRVQSFRSVREDEVTQMLRKLSEQEASGTVVNLTEILMSFSSSLICRIAFGKKKYVDEYEEVVGKGKRRSRLQVMLNEAQALLTEFFFSDYFPLLGWVDWLTGKRQRLEKTFKELDAFYERVILEHMDSAMAKDGDGEKEVEDIIDIFLQLLRDRSLSFHFTLDHIKAVLMVTSSFNLLFHCIEYYSDPPSATIVWAMTALLKNGEVMRKVQEEVRSLFGEKDFINEDDVERLPYLKAVVKETLRLFPPSPLLLPRVAIERCSIEGYEIEAKTLVYVNAWAIATDPENWEKPQEFCPERFLGSEMELKGKEFEVLPFGSGRRMCPAKHMGMVNVELSLANLVHTFDWEVDPGSDREEMLGTEVKPGVTMHKKTDLYLVPKKRTT 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03187 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Vimu1g03187 520 Pfam Cytochrome P450 30 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03187 520 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03187 520 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03187 520 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03187 520 FunFam Cytochrome P450 83B1 17 514 - -
Vimu1g03187 520 CDD CYP71-like 60 511 - -
Vimu1g03187 520 Gene3D Cytochrome P450 22 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03187 520 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03187 520 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03187 520 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03187 520 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03187 520 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03187 520 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03187 520 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03187 520 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03187 520 PANTHER CYTOCHROME P450 71B11-RELATED 18 516 - -
Vimu1g03187 520 SUPERFAMILY Cytochrome P450 30 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03187 Vimu-Chr1 44043648 44046344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g03187 17 517 Cytochrome P450 AT4G31500 43.762 3.23e-148 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g03187 - - vun:114192989 868.611