Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03172 ATGAAAGTTGGTTTGCACAATTTCAGAATAGAGCAAGTGAGATTGAACAGAAAAGATGGGCTGGCAAAGGTGGTGGGAACCCTTTTGTGTGTAGTTGGGGCCACTGTGATCACACTTTACAAAGGTCCAACAATATACAGCCCAGCAACCCGTGTGAACAGCATGAACAGCAACACAATAACAACACCAGTGTTTGATTTTGGGACACTCTCACTGGGAGATGCAAAGGGAAAGAACTGGACCCTGGGATGCTTGTACCTGATTGGACACTGCTTGTCTTGGTCTGGTTGGCTTGTGCTGCAAGCACCAGTTCTGAAGAAGTACCCGGCTCGTCTCTCTTTCACTTCCTACACCTGTTTCTTTGGCCTCTTGCAGTTCCTGGTCATTGCTTTGGTCCTTGAAAGAGATGCACAGGCTTGGCTTTTCCACTCTGGTGGAGAAGCTTTCACAATTTTATATGCGGGAGTGGTGGCATCAGGAATTGCCTTCGCTGTACAAATATGGTGCATTGAAAGAGGTGGCCCTGTGTTTGTTGCTGTGTATCAACCTGTTCAGACTTTTGTTGTCGCCATCATGGCAACCATAGCTTTAGGAGAAGAGTTCTACTTGGGAGGGATCATTGGGGCAGTGTTGATTGTAGCGGGACTGTACTTTGTTTTGTGGGGTAAAAGTGAAGAGAGGAAATTTGCTAGAGAACAGCTTGCTATTGCATCCACTACTGATCACAGCATCATAAGGCCTGCAAGCCACGCCAAAGCATCACTTGCTCAGCCACTTCTTTCTTCATCAACAGAGAATGTTTGA 804 0.4652 MKVGLHNFRIEQVRLNRKDGLAKVVGTLLCVVGATVITLYKGPTIYSPATRVNSMNSNTITTPVFDFGTLSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSFTSYTCFFGLLQFLVIALVLERDAQAWLFHSGGEAFTILYAGVVASGIAFAVQIWCIERGGPVFVAVYQPVQTFVVAIMATIALGEEFYLGGIIGAVLIVAGLYFVLWGKSEERKFAREQLAIASTTDHSIIRPASHAKASLAQPLLSSSTENV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03172 267 SUPERFAMILY Multidrug resistance efflux transporter EmrE 122 225 - -
Vimu1g03172 267 PANTHER WAT1-RELATED PROTEIN 10 232 IPR030184 GO:0016020|GO:0022857
Vimu1g03172 267 Pfam EamA-like transporter family 82 220 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03172 Vimu-Chr1 43898355 43900338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g03172 8 267 Nodulin-like Gene Family AT1G75500 69.288 6.38e-130 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g03172 - - gmx:100792395 458.373