Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03156 ATGCATCATCAGAAGCAGTGCAATCTCACAGCAACATATGCATTGTTGAAACAGTCAAAGGCTTGGTTTCCCACATTACATGATTTGGTAAAAAGATTGGGTGGTTCGAAATTTGAGTACTATATATGTCACAGTAGCCTATCCATTAGAACACACGCAATCACCAAAATTAGCAAGCTCTCAAATTCAGTTCCTATACTTGTCACCATGACTTTCATCAAACTCACTCTTCTTGCAATGATAATAGCCTTTTTCTCTGTTAAACTCTCCTGTGCTCACCCTGGCTTTCGTTTCGGCCGGGGTGGTCATCATGGAGGGATATCTTTTGGCCTTTCACCTGAATTCTATCAGTTTTCTTGCCCCCAAGCTAACGACATTGTCATGTCAGTGTTAGAGAAGGCCATTGCAAAAGACATGAGAATGGCTGCTTCTCTACTTCGACTCCACTTTCATGATTGCTTTGTACAGGGCTGCGATGCATCAATTTTGTTGGATGATAGCAGAAAAATAGTCAGCGAAAAAAATTCTGGACCAAACAAAAACTCTGTCCGAGGTTTTGAAGTGATTGATGAAATCAAGTCCAGGTTGGAAGAAGCATGTCCTCAGACTGTGTCCTGTGCAGACATTCTTGCCCTTGCTGCTAGGGGTTCCACTGTTCTTAGTGGAGGACCTAACTGGGAACTCCCATTAGGGAGAAGAGACTCAAAAACAGCAAGCCTGAGCGGGTCAAACAAAAATATTCCTCCACCAAACGCCACCATTGAAACTCTGATAACATTTTTCAAGCGTCAGGGCCTTGATGAAGTAGACCTTGTTGCTCTCTCAGGTGCACATACCATTGGGGTGGCAAGATGTGCCACATTCAAGCAGAGACTATACAACCAAAAGGGAAACAACGAACCAGATGAGAATCTAGAAAAATCCTTTTACTTTGATTTGAAGACAATGTGCCCAAAATCAGGAGGTGACAACTTGATTTCTCCCTTGGACTTTGGCTCCCCAAGAATGTTTGATAATACATATTTCAAACTCATTCTCAGGGGAAAAGGACTTCTTAACTCAGACGAAGTGCTTCTTGTGGGAAATGTTAAGGAAACTCGTAAGCTGGTCAAGAAATACGCAGAAGATGAGAGCCTCTTCTTTGAGCAATTTTCCACCTCCATGATCAAGATGGGCAACCTTCGTCCTCTCACTGGATTCAATGGTCAAGTTAGGAAAAACTGTCGCAGAGTTAATTAA 1239 0.4253 MHHQKQCNLTATYALLKQSKAWFPTLHDLVKRLGGSKFEYYICHSSLSIRTHAITKISKLSNSVPILVTMTFIKLTLLAMIIAFFSVKLSCAHPGFRFGRGGHHGGISFGLSPEFYQFSCPQANDIVMSVLEKAIAKDMRMAASLLRLHFHDCFVQGCDASILLDDSRKIVSEKNSGPNKNSVRGFEVIDEIKSRLEEACPQTVSCADILALAARGSTVLSGGPNWELPLGRRDSKTASLSGSNKNIPPPNATIETLITFFKRQGLDEVDLVALSGAHTIGVARCATFKQRLYNQKGNNEPDENLEKSFYFDLKTMCPKSGGDNLISPLDFGSPRMFDNTYFKLILRGKGLLNSDEVLLVGNVKETRKLVKKYAEDESLFFEQFSTSMIKMGNLRPLTGFNGQVRKNCRRVN 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03156 412 Pfam Peroxidase 129 376 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 Gene3D Peroxidase, domain 2 248 392 - -
Vimu1g03156 412 ProSiteProfiles Plant heme peroxidase family profile. 110 412 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 Gene3D - 115 412 - -
Vimu1g03156 412 FunFam Peroxidase 114 256 - -
Vimu1g03156 412 CDD secretory_peroxidase 110 411 IPR033905 GO:0004601|GO:0042744
Vimu1g03156 412 PANTHER PEROXIDASE 72-RELATED 109 411 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 SUPERFAMILY Heme-dependent peroxidases 110 412 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 PRINTS Plant peroxidase signature 144 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 PRINTS Plant peroxidase signature 120 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 PRINTS Plant peroxidase signature 184 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 PRINTS Plant peroxidase signature 269 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 PRINTS Plant peroxidase signature 222 237 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 PRINTS Plant peroxidase signature 328 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 PRINTS Plant peroxidase signature 203 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 PRINTS Plant peroxidase signature 344 361 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 PRINTS Plant peroxidase signature 386 399 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 PRINTS Haem peroxidase superfamily signature 270 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 PRINTS Haem peroxidase superfamily signature 204 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 PRINTS Haem peroxidase superfamily signature 142 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 PRINTS Haem peroxidase superfamily signature 330 345 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 PRINTS Haem peroxidase superfamily signature 222 234 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu1g03156 412 ProSitePatterns Peroxidases active site signature. 142 153 IPR019794 GO:0004601
Vimu1g03156 412 FunFam Peroxidase 248 391 - -
Vimu1g03156 412 ProSitePatterns Peroxidases proximal heme-ligand signature. 270 280 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03156 Vimu-Chr1 43774421 43775954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g03156 70 412 Peroxidase AT1G44970 69.942 1.88e-177 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g03156 K00430 - gmx:102660391 624.009