Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03127 ATGGGTTCAGTTTCTGAAACCGTTTGTGTCACCGGAGCTTCTGGTTTCATCGGGTCATGGCTTGTTATGAGACTCATCGAGCGTGGCTACACGGTTCGAGCCACCGTTCGTGACCCAGGGAACATGAAGAAGGTGAAGCATTTGGTGGAGCTGCCGGGTGCAAAGACAAAGCTGTCTCTGTGGAAGGCTGACCTAGGCGAAGAGGGAAGCTTTGACGAAGCCATTAAAGGGTGCACCGGAGTTTTTCATGTGGCAACTCCGATGGACTTTGAGTCTGCGGACCCTGAGAATGAAGTGATAAAGCCAACAGTAAACGGAATTCTGGATATCATGAAAGCATGCATGAAAGCAAAGACAGTGAGAAGGCTTGTGTTTACGTCCTCAGCAGGAACCCTTAATGTTATTGAGCAGCAGAAGCCCGTTTTTGATGAAACTTGTTGGAGTGACGTTGAGTTTTGTAGGAGAGTAAAGATGACTGGTTGGATGTATTTCGTTTCTAAAACACTGGCCGAGAAAGAAGCATGGAAATTCGCCAAAGAGCATGGCATGGACTTCATCACTATCATTCCACCTCTTGTTGTTGGTCCCTTTCTCATGCCAACCATGCCACCAAGCCTAATCACTGCTCTTTCTCCCATCACAGGAAATGAGAGTCATTATTCGATCATAAAGCAAGGTCAATTCGTGCATTTGGATGATCTGTGTCTTGCTCACATATTTCTGTTTGAACAGCCAAAAGTTGAAGGGAGGTACATATGCAGTGCATGTGACACTACTATTCATCACATTGCCAAACTAATCAATGAAAAATACCCTGAGTACAACATCCCCACCAAGTTCAAGAATATTCCAGATGAATTGGAGATTGTGAGATTTTCTTCAAAGAAGATAAAAGATTTAGGATTCCAATTTAAGTACAGCTTAGAGGACATGTACTGTGGAGCAATTGATACATGCAGAGACAAAGAGCTTCTTCCCAAATTTGCTGAAACTCCACTCAGTAGTATCATTCAGAATGCAGAAACTCCAACGAAGGGCGTCATTCAGAACTAA 1053 0.4397 MGSVSETVCVTGASGFIGSWLVMRLIERGYTVRATVRDPGNMKKVKHLVELPGAKTKLSLWKADLGEEGSFDEAIKGCTGVFHVATPMDFESADPENEVIKPTVNGILDIMKACMKAKTVRRLVFTSSAGTLNVIEQQKPVFDETCWSDVEFCRRVKMTGWMYFVSKTLAEKEAWKFAKEHGMDFITIIPPLVVGPFLMPTMPPSLITALSPITGNESHYSIIKQGQFVHLDDLCLAHIFLFEQPKVEGRYICSACDTTIHHIAKLINEKYPEYNIPTKFKNIPDELEIVRFSSKKIKDLGFQFKYSLEDMYCGAIDTCRDKELLPKFAETPLSSIIQNAETPTKGVIQN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03127 350 CDD FR_SDR_e 8 302 - -
Vimu1g03127 350 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 311 - -
Vimu1g03127 350 FunFam Dihydroflavonol reductase 5 327 - -
Vimu1g03127 350 Pfam NAD dependent epimerase/dehydratase family 8 246 IPR001509 -
Vimu1g03127 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 319 IPR036291 -
Vimu1g03127 350 Gene3D - 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03127 Vimu-Chr1 43593142 43594839 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g03127 1 304 Miscellaneous Gene Families AT1G09510 44.625 3.12e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g03127 K13082 - gmx:548087 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03127 1 43593142 43594839 Vimu1g03127 1 43593142 43594839 ECH