Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03120 GAGGTGAAAATCCATGTTCTCTCATGCCATGATGATGATCCTTCTGCTGCAAATGTTAAGACCTTGGCTGGAGGTAGTGTTGCAAACACGGTTCGAGGGCTGAGAACTGGGTTTGGGATTTCTAGTGGAATTATTGGGGCTTGTGGAGATGATGACCAAGGAGAGTTCTTTGTCCATAACATGAATTTCAATGGAGTTGACCTCTCTAGACTCAGGAAGAAGAAAGGACATACAGCACAGTGGTTGATGGTCAGGAATTTCAAACAACCACTTCTGAAGCTACTGGAGTCAGGGAACATTGACCTCTGTTTTGCCAATGAGGATGAGGCAACAGAGCTTCTAAGGTAA 348 0.4483 EVKIHVLSCHDDDPSAANVKTLAGGSVANTVRGLRTGFGISSGIIGACGDDDQGEFFVHNMNFNGVDLSRLRKKKGHTAQWLMVRNFKQPLLKLLESGNIDLCFANEDEATELLR 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03120 115 Gene3D - 23 78 IPR029056 -
Vimu1g03120 115 Pfam pfkB family carbohydrate kinase 10 84 IPR011611 -
Vimu1g03120 115 SUPERFAMILY Ribokinase-like 16 113 IPR029056 -
Vimu1g03120 115 PANTHER SUGAR KINASE 16 81 - -
Vimu1g03120 115 Gene3D - 17 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03120 Vimu-Chr1 43557847 43560499 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g03120 - - gmx:100795959 131.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03120 1 43557847 43560499 Vimu1g03120 1 43557847 43560499 ECH