Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03092 ATGGGTTCTTCTTGGCCTGCTACCAGAACCGATCAAGGAGAAAACGACCCCTCCACGCTCTGGCTCAACGATCCTGAAGTTAGGGATTCCATTAACATTGTCGCAGCTACCCCTTCTGTATCCGTTTTTGTTCCCCCTCATAATAGTACTCACGGGATTTCAAAGACTATGCAGTTCGAGAATTCTATTCAAACCCCCAGTTGCAGTACCTTAACTGAAACCCCAAGCTCTATCCAAGTTGTTCCACAGAACCAAAGCGTGTTCTCCAAAGAATTGAACTTCTCTGAGTACTCTTTTGACCCCAAGAGTGGCAACACTAACAATCAGCATTCCCTGAAGCTCGAATCCTGCGAGATTCTCAGCTTCAGCGATAGCAAGAGAACCTCTATTACGGAGGTGGGGGCATCAATGGTAATTCCAATTCCAATTCAAATTTCTTCTCTGGTCAATCAACGTTTGTTGTTGTTGCATATGAGAACAACAATAACAACAACGGGCATAGACGGGTGA 510 0.451 MGSSWPATRTDQGENDPSTLWLNDPEVRDSINIVAATPSVSVFVPPHNSTHGISKTMQFENSIQTPSCSTLTETPSSIQVVPQNQSVFSKELNFSEYSFDPKSGNTNNQHSLKLESCEILSFSDSKRTSITEVGASMVIPIPIQISSLVNQRLLLLHMRTTITTTGIDG 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03092 169 MobiDBLite consensus disorder prediction 1 21 - -
Vimu1g03092 169 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03092 Vimu-Chr1 43356813 43357322 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g03092 11 129 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 38.168 2.05e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g03092 K13422 - gmx:100776289 192.586