Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03086 ATGCATCATCTTCTACTTGTTTTCGTTCTTCTTCTTCTTATAGTCTTTGTAGTAAGAGTTGCATATTCTGTCATTTGGGTTCCATGGATCATTGTACGTCACTTTCGTCTGCAAGGCATCACGGGACCTCCCTACCGTCTGATCAAAGGGAACACAGATGAGATCCACCGCATGTACAGGGAGGTTCAATCCAAGCCAATGGCTTTGTGCCACGACATCTTGGAGCGCGTGTGTCCATTTTATCACAGGTGGTCACGCGTGTATGGGAAAACTGTTTTGTACTGGCACGGGTCGAAGCCCAAACTGGTACTATCCGACCCGGATATGCTCAAGGAGATTCTTTTGAAAACGGGTGAATGGTTTGAGAGGATAGATCCGAACCCGTCGGTGAAACAGTTCTTTGGACAAGGGATTCTGGTGTTGAAAGGAGAGAAATGGGCTGTGCATAGAGCAATCGCTAACCAGGCTTTTAAAATAGAACGTGTTAAGTTATGGGTTCCGCAAATCACTGATTGCACAAAAACAATGTTTTACAAGTGGGAAGATAATAACAAAGGTAGTGATGAATTTGAGATTGAAGTGTGTAAAGATCTGCATGATCTTACATCTGATATTATATCCAAAGTTGCTTTTGGAAGTAACTACGAAGAAGGGAAAGAGATTTTTGAGTTACTAGAAGAACATTATCATTTGGTCTGTCTAGCCATCAGAAGTGTTTATATTCCTGGATTCAGGTTTCTACCAACTAAGAAGAACAGAGAAAGAAAGAGGTTAGAGAAAAAAACATATGAAGCAATTAAGGTACTGATTGAGGAGAATCTAAAAGCAGAACATGATTCAGAAAACTTGCTTTCTTTGTTGATGTCTTCTCACAAATTCATCAACAATGAGACACATAAATTAAGGTTGGATGAAATAGTTGATGATTGCAAGAATTTTTACATGGCTGGAAAGGAAACAAGTGCCACTTCATTAAGGTTAAATCAAGAATGGCAAAGCAAGGCACGTGAAGAGGTGCTGAGTGTTCTTGGACCTAATTCTTTCCCAACTTCAGAAACATTAAGTGAACTCAAACTTGTTAACTTGATACTTCAAGAAACACTAAGACTGTACCCTAATCCAGGGGCATTGGTGAGGGAAGCAAGTAGAAAAGTTAAGTTGGGGAAGATTGATATTCCAGCTGGTACACAACTCTATTTGTCTATCACTTCAGCTCATCATGATACTGAGTTTTGGGGAGAAGATGCTCTTCAATTCAATCCTATGAGATTTGCAGAGCCTAGGAAGCATTTAGCTCCATATTTTCCCTTTGGATTAGGTCCTAAATATTGTGTAGGGCAAAATCTGGCTGTGTTTGAAATGAAAATTGTACTTGCCATGGTGTTGCAGAGGTTTTCTTTTGTTGTATCACCTTCGTATGCTCATGCTCCAATGTTGTTGATGACTATGACACCTCAATATGGCATGCAAATTATCTTTAGGAAACTATGA 1491 0.3977 MHHLLLVFVLLLLIVFVVRVAYSVIWVPWIIVRHFRLQGITGPPYRLIKGNTDEIHRMYREVQSKPMALCHDILERVCPFYHRWSRVYGKTVLYWHGSKPKLVLSDPDMLKEILLKTGEWFERIDPNPSVKQFFGQGILVLKGEKWAVHRAIANQAFKIERVKLWVPQITDCTKTMFYKWEDNNKGSDEFEIEVCKDLHDLTSDIISKVAFGSNYEEGKEIFELLEEHYHLVCLAIRSVYIPGFRFLPTKKNRERKRLEKKTYEAIKVLIEENLKAEHDSENLLSLLMSSHKFINNETHKLRLDEIVDDCKNFYMAGKETSATSLRLNQEWQSKAREEVLSVLGPNSFPTSETLSELKLVNLILQETLRLYPNPGALVREASRKVKLGKIDIPAGTQLYLSITSAHHDTEFWGEDALQFNPMRFAEPRKHLAPYFPFGLGPKYCVGQNLAVFEMKIVLAMVLQRFSFVVSPSYAHAPMLLMTMTPQYGMQIIFRKL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03086 496 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03086 496 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03086 496 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03086 496 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03086 496 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03086 496 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03086 496 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03086 496 SUPERFAMILY Cytochrome P450 74 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03086 496 Pfam Cytochrome P450 81 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03086 496 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03086 496 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03086 496 PRINTS P450 superfamily signature 327 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03086 496 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03086 496 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 488 - -
Vimu1g03086 496 Gene3D Cytochrome P450 29 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03086 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03086 Vimu-Chr1 43291240 43293886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g03086 22 496 Cytochrome P450 AT1G75130 49.897 2.83e-172 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g03086 - - gmx:100789281 826.239