Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03062 ATGGGTTTCATCCATAACCAAGCTTCACCCTCTCACACAGGAATTAGAACTGTGGGTGTTGAGAAAGTTTGTAACTTTTCCATTGATTCTGATCTCTGCATCTCCATAGCCACTTGGAACATGAATGGCCAGGTTACGTTTGAAGATTTAGCAGAAATGGTTGGTAGCAATCGTGAGTTTGATCTTCTGGCTGTTGGGTTGCAAGAGGCTCCTCCATGTCCGCGAAACAAAGTTGCAGCCATGCTTTCAGCAGCTCTGGATGAAAGTCATACCCTGATAGGTAAAGTTATCATGCAATCTTTGCAGTTGTACTTGTTTGGGCCAAAGGATGCAAGATCATTCATCAATGAATTGAAGGTAGACAAACAATCTTTTGGAGGCTGTGGAGGAATAATTGGAAGAAAGAAAGGGGCTGTAGCAATTCGCATAAACTACAAAGGCATTAGAATGGTTTTCATCTCGTGCCACCTCGCAGCTCATGAACACAATGTGGAAGAAAGAAATTCACAATGCAGACACATATCACACAGGCTATTTTCCAAGTTCTGGAACCCTTATTCAAGACCCTCCCACATTACTATCTGGTTAGGAGATCTGAATTATAGGCTTCAAGGAATTAATACATACCCTGCAAGAACTTTGATACACCAAGATCTTCATAGGCGTTTGCATAACAAGGACCAGCTTCTGCAAGAAGCAAGTCGAGGGCAAATTTTCAACGGCTTTTGTGAGGGAACGTTGACTTTCAAACCAACCTATAAGTACAACAAAGGAAGTAGCAACTATGATACAAGTCACAAGGTACGAGTGCCAGCATGGACAGATCGTATATTGTACAAGATAGAAGACGAAAATAAGATGGAAGCAAGTCTGCATTCATACGAGTCGATTGATAAAATATACGGCTCTGACCATAAACCAGTAAAGGCACATCTCTGCTTAAGACTTCGTCAAATTCCAACAAAAACCTAG 972 0.4156 MGFIHNQASPSHTGIRTVGVEKVCNFSIDSDLCISIATWNMNGQVTFEDLAEMVGSNREFDLLAVGLQEAPPCPRNKVAAMLSAALDESHTLIGKVIMQSLQLYLFGPKDARSFINELKVDKQSFGGCGGIIGRKKGAVAIRINYKGIRMVFISCHLAAHEHNVEERNSQCRHISHRLFSKFWNPYSRPSHITIWLGDLNYRLQGINTYPARTLIHQDLHRRLHNKDQLLQEASRGQIFNGFCEGTLTFKPTYKYNKGSSNYDTSHKVRVPAWTDRILYKIEDENKMEASLHSYESIDKIYGSDHKPVKAHLCLRLRQIPTKT 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03062 323 FunFam Type IV inositol polyphosphate 5-phosphatase 11 12 321 - -
Vimu1g03062 323 Pfam Endonuclease/Exonuclease/phosphatase family 37 305 IPR005135 GO:0003824
Vimu1g03062 323 SUPERFAMILY DNase I-like 20 317 IPR036691 -
Vimu1g03062 323 Gene3D Endonuclease/exonuclease/phosphatase 13 323 IPR036691 -
Vimu1g03062 323 PANTHER INOSITOL 5-PHOSPHATASE 21 319 IPR046985 GO:0046856
Vimu1g03062 323 SMART i5p_5 30 320 IPR000300 GO:0016791|GO:0046856
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g03062 15 319 Acyl Lipid Metabolism Gene Families AT2G43900 28.226 3.89e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g03062 - - gmx:100810977 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03062 1 43058303 43063087 Vimu1g03062 1 43058303 43063087 ECH