Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03056 ATGGCAGTTTCCCTTTCGGCACTCAGCACTTCCCTCTCTTCACTTTCTTTCTCTTCCCACATTTCTCAGAGACCCAACACTCTCTCCTTCGCCACAACCCTCTCTCTCTCGCGCTTCCCCAAAACCCCTTCCCTCGTCATCTCCGCCACCGCGCTCGCCGAACCGGAAACCGAAGACCTCAAGAAGTTCGTCAAATCGAGGCTTCCTGGTGGCTTCGCCGCCCAGACTATCATAGGCACCGGTCGCCGTAAGAGCGCCATCGCTCGCGTCGTTCTCCAGGAAGGAACCGGCAAATTCATCATCAATTACCGGGATGCTAAGTGCCAACATCTGCTTCACAACCCAGGACAAACTTCTCCTGCTGAAAACAAGAACACAAAAAGGATGGATTTCTTTGTTCTCACTGTGGGATCTTTTGTTGGTTTTCAAGTTCCTTTTATTTCCCACAATCTCTACCAAGCATCCCTTGAGGAATATCTTCAAGGAAACCCATTGTGGCTTCAATACATTAAGGTCCCTTTGATAACTTTGGGATATGAAAGTAGTTATGATGTTTTTGTCAAAGCTGAGGGTGGTGGCTTGTCTGGTCAGGCTCAGGCAATCTCTCTTGGCATTGCCCGTGCCTTGCTGAAGGTGAGCGAAGATCATAGAGCACCTTTGAGACAGGAAGGACTTCTTACCAGAGATTCCAGAGTGGTTGAGAGGAAGAAAGTTGGTTTGAAGAAAGCTCGTAAAGCCCCTCAATATTCCAAACGTTGA 759 0.4875 MAVSLSALSTSLSSLSFSSHISQRPNTLSFATTLSLSRFPKTPSLVISATALAEPETEDLKKFVKSRLPGGFAAQTIIGTGRRKSAIARVVLQEGTGKFIINYRDAKCQHLLHNPGQTSPAENKNTKRMDFFVLTVGSFVGFQVPFISHNLYQASLEEYLQGNPLWLQYIKVPLITLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRAPLRQEGLLTRDSRVVERKKVGLKKARKAPQYSKR 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03056 252 SUPERFAMILY Ribosomal protein S5 domain 2-like 77 108 IPR020568 -
Vimu1g03056 252 Gene3D - 68 138 IPR014721 -
Vimu1g03056 252 Gene3D - 148 252 IPR014721 -
Vimu1g03056 252 PANTHER RIBOSOMAL PROTEIN S9 60 106 IPR000754 GO:0003735|GO:0005840|GO:0006412
Vimu1g03056 252 Hamap 30S ribosomal protein S9 [rpsI]. 72 252 IPR023035 -
Vimu1g03056 252 SUPERFAMILY Ribosomal protein S5 domain 2-like 155 252 IPR020568 -
Vimu1g03056 252 Pfam Ribosomal protein S9/S16 154 252 IPR000754 GO:0003735|GO:0005840|GO:0006412
Vimu1g03056 252 ProSitePatterns Ribosomal protein S9 signature. 191 209 IPR020574 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g03056 K02996 - gmx:100305975 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03056 1 42992340 42994433 Vimu1g03056 1 42992340 42994433 ECH