Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g03053 ATGGCATCATCGTCTTCCTCGACGCTCTCCTCCCCATTCCTGCGACTGGAGTTCCCCTCTGCAAGAAAACAACGTTCTTCCAATTACGTCCCCTTCATCAGAGCCTCCGTTTCTGAGAAACCACCACCGGCAGTGTCGGTCACCTCCCCCGAGCCCACCAAGCTCCCCATCCGCAAAATCCCCGGTGACTGGGGTTTGCCGGTCATCGGTCCCTTAAAGGACCGTCAAGACTATTTCTACAATCAAGGCCGCGACGAGTTCTTCAAATCTCGCATCCAAAAGTACCAGTCAACGGTCTTCCGCACCAACATGCCTCCCGGTCCCTTCATCACCTTCAAACCAAACGTCGTCGTTCTACTCGACGCCAAGAGCTTCCCCGTCCTCTTCGACACCTCCAAGGTCGAGAAAAAAGATGTTTTCACCGGAACATACATGCCCTCCACCGACCTCACCGGCGGCTACAGAGTCCTCTCCTACCTCGACCCCTCCGAACCCAAACACGCCCTCCTCAAGCAGCTCATGTTTTTCCTCCTCAAGTCCCGACGCGCCCACGTCATCCCGGAGTTCCACGCCTCCTACGAAGACCTCTTCAACCAGCTCGAGTCCGACCTCGCCGAAACCGGCAAAGCCAGCTTCGGCGACGCCAACGACCAAGCCGCGTTCAACTTCCTCGCCCGGTCCCTCTTCGCCGCCAACCCCGCCGACACCAAACTGGGCCAAGACGGCCCAAAGATAGTGCAGAAATGGGTTCTCTTCCAGCTGGGCCCACTCCTCCGCCTGGGTCTCCCTCAGTTTCTGGAAGAATCCACCATTCGCACCTTCCGCCTCCCTGCCTCCCTCATCAAGAAAGACTACCAGAGACTCTACGACTTCTTCTACTCCTCTTCTTCCTCCGTCCTCGACGAAGCAGAGCGATTGGGAATCACGCGCGACGAGGCTTGCCACAATCTTTTGTTCGCCACCTGCTTCAACTCCTTCGGCGGGATGAAGCTGTTCTTCCCCAACATCATCAAGTGGATCGGACGAGCGGGGGTGAAGCTCCACGCGCGCCTGGCGCAGGAGATTCGGTCCGCCGTGAGAGACGCCGGCGGGGAGATCACGATGGCGGCGATGGAGAAGATGCCTCTGATGAAGTCGGTGGTTTACGAAGCCTTCCGCATCGACCCTCCAGTGCCGTTGCAGTTCGGGAGGGCGAAGAGGGACCTTCTGATCGAGAGCCACGATCACGCCTTCCAGGTGAAGGAGGGGGATCTGCTTTTCGGGTACCAACCGTTTGCCACGAAGGATCCTAGGATCTTCGAGAGGGCCGAGGAATTTGTGGGAGACCGGTTCGTAGGGGAAGAAGGAGAGAAGCTCCTGAAACACGTGCTGTGGTCGAATGGACCTGAAACTGAATCTCCCACACTCGGAAACAAGCAATGTGCTGGGAAGGATTTCGTGACCTTAGTCTCAAGGCTTCTTCTTGTCGAGTTTTTTCTCCGTTATGACTCCTTCGATATTCAGGTTGGAACTTCTCCGTTAGGTTCTAAAGTCACCATTACCTCCCTCAAGAGATCAAGCTTTTAG 1566 0.5639 MASSSSSTLSSPFLRLEFPSARKQRSSNYVPFIRASVSEKPPPAVSVTSPEPTKLPIRKIPGDWGLPVIGPLKDRQDYFYNQGRDEFFKSRIQKYQSTVFRTNMPPGPFITFKPNVVVLLDAKSFPVLFDTSKVEKKDVFTGTYMPSTDLTGGYRVLSYLDPSEPKHALLKQLMFFLLKSRRAHVIPEFHASYEDLFNQLESDLAETGKASFGDANDQAAFNFLARSLFAANPADTKLGQDGPKIVQKWVLFQLGPLLRLGLPQFLEESTIRTFRLPASLIKKDYQRLYDFFYSSSSSVLDEAERLGITRDEACHNLLFATCFNSFGGMKLFFPNIIKWIGRAGVKLHARLAQEIRSAVRDAGGEITMAAMEKMPLMKSVVYEAFRIDPPVPLQFGRAKRDLLIESHDHAFQVKEGDLLFGYQPFATKDPRIFERAEEFVGDRFVGEEGEKLLKHVLWSNGPETESPTLGNKQCAGKDFVTLVSRLLLVEFFLRYDSFDIQVGTSPLGSKVTITSLKRSSF 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g03053 521 Gene3D Cytochrome P450 55 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03053 521 Pfam Cytochrome P450 348 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03053 521 CDD CYP74 89 514 - -
Vimu1g03053 521 PRINTS E-class P450 group IV signature 427 445 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03053 521 PRINTS E-class P450 group IV signature 474 492 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03053 521 PRINTS E-class P450 group IV signature 374 390 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g03053 521 FunFam Allene oxide synthase, chloroplastic 55 521 - -
Vimu1g03053 521 PANTHER CYTOCHROME P450 26 55 495 - -
Vimu1g03053 521 SUPERFAMILY Cytochrome P450 55 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g03053 Vimu-Chr1 42954639 42957461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g03053 33 521 Cytochrome P450 AT5G42650 65.644 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g03053 K01723 - gmx:100037481 920.998