Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02984 ATGCTGATCAGCCCTGAGGCTGCACGTTTTGTGCTAGTGACTCAAGCTCACTTGTTCAAACCAACTTACCCGAAAAGCAAAGAGCGTTTGATTGGTCCTTTTGCTTTGTTTTTCCATCAGGGAGACTACCACACTCGTCTGAGGAAGCTTGTTCAGAGGTCACTTTCTTTTGAAGCACTTCGCAACTTGGTGCCCCATATTGAAGCCTTAGTGTTATCTGGCATGAACTCTTGGGGTGATGGCCAAATCATTAACATGTTTAAGGAAATGAAAAGGATTTCTTTTGAAGTTGGAATCCTCACAACTTTTGGCCATCTAGAGCCACGTTCGAGGGAGGAGCTAAAGAAGAATTACCGTATTGTGGATGCTGGTTACAATTCCTTCCCAACTTGCATTCCAGGAACACAGTACAAAAAAGCACTGCTGGCTAGAAAGAGACTCGGGAAGATTATAAGTGAGATTATCTGTGAGAGGAAGGAGAAGAAGTTGGTCGAAAGGGATCTTTTGAGTTGTCTGTTGAATTGGAAAGGTGAAGGAGGAGAAGTGTTATCTGATGACCAAATTGCAGATAACATTATTGGGGTGCTTTTTGCTGCTCAGGACACCACAGCTAGTGCCATGACATGGGTTGTAAAGTACCTGCATGATGAACCGAAACTTCTGGAGTCAGTAAAGGCAGAGCAGAAGGCTATTCAAAAGTCTAATGACTGTAATCTACCACTGAGTTGGGATCAGACTAGAAACATGAGAATTACTCACAAGGTTGTGTTAGAGAGTTTGAGAATGGCAAGCATTATTTCATTCCCTTTCAGAGAGGCAATAGCTGATGTGGAGTACAAGGGATTCTTAATACCAAAAGGGTGGAAAGCCATGCCTCTATTCAGAAATATTCACCACAATCCTGAGTTTTTTCCAGAGCCTCAGAAATTCAACCCTTCAAGGTTTGAGGTGGCACCAAAGCCCAATACTTTCATGCCATTTGGTAGTGGAGTGCATGCCTGCCCTGGCAATGAGCTTGCTAAGCTGGAGACACTGATTATGATCCATCATTTGGTCACCAAATTTAGGTGGGAAGTGGTAGGATCCAAGGGTGGAATTCAGTATGGTCCATTCCCCTTGCCACTGAATGGACTCCCAGCTAGATGTTGGAGAGAATCTACCAGCTAG 1167 0.4396 MLISPEAARFVLVTQAHLFKPTYPKSKERLIGPFALFFHQGDYHTRLRKLVQRSLSFEALRNLVPHIEALVLSGMNSWGDGQIINMFKEMKRISFEVGILTTFGHLEPRSREELKKNYRIVDAGYNSFPTCIPGTQYKKALLARKRLGKIISEIICERKEKKLVERDLLSCLLNWKGEGGEVLSDDQIADNIIGVLFAAQDTTASAMTWVVKYLHDEPKLLESVKAEQKAIQKSNDCNLPLSWDQTRNMRITHKVVLESLRMASIISFPFREAIADVEYKGFLIPKGWKAMPLFRNIHHNPEFFPEPQKFNPSRFEVAPKPNTFMPFGSGVHACPGNELAKLETLIMIHHLVTKFRWEVVGSKGGIQYGPFPLPLNGLPARCWRESTS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02984 388 Gene3D Cytochrome P450 1 383 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02984 388 PRINTS E-class P450 group I signature 253 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02984 388 PRINTS E-class P450 group I signature 324 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02984 388 PRINTS E-class P450 group I signature 187 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02984 388 PRINTS E-class P450 group I signature 293 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02984 388 PRINTS E-class P450 group I signature 207 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02984 388 PRINTS E-class P450 group I signature 334 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02984 388 PANTHER CYTOCHROME P450 26 2 370 - -
Vimu1g02984 388 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 327 336 IPR017972 GO:0005506|GO:0016705
Vimu1g02984 388 SUPERFAMILY Cytochrome P450 2 382 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02984 388 FunFam Abscisic acid 8 1 384 - -
Vimu1g02984 388 PRINTS P450 superfamily signature 325 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02984 388 PRINTS P450 superfamily signature 254 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02984 388 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02984 388 PRINTS P450 superfamily signature 198 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02984 388 CDD CYP90-like 1 381 - -
Vimu1g02984 388 Pfam Cytochrome P450 2 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02984 Vimu-Chr1 42224892 42229123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02984 1 386 Cytochrome P450 AT3G19270 67.959 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02984 K09843 - gmx:100779978 738.028