Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02968 ATGGAAAACAGCGACACTAACACACCGACCACCGCAGAGGCAGAAGTAGCACACGATTTCCCCGGTCTCATCCGTGTCTTCACTGACGGTCGCATCCAACGTTTCAAAGGAACCGACGTCGTTCCACCCTCAACCCCCACCACTCACCCCGTCTCCTCCAAAGACGTCAATCTCAATCCTCATTCCACTCTCTCCGCTCGCCTCTTCCTCCCGACACCTCCATCCATCACCACCAACCGCCGCCGCAGCCTCCCTCTCTTGGTCTACTTCCACGGCGGTGGCTTCTGCACCTCCTCCCCCTTCACGTCAACCTACCACCACTACATCGCAGCTGTCGCTGCCGAAGCCAAGCTCGTCGCAGTCTCCGTCCAGTACAGGCTGGCCCCGGAGCACCCTATTCCGGCAGCGTACGAGGATTCATGGGCTGCACTGCAATGGGTCGCGTCACATCGCAGTAACGCTGGACCAGAGCCTTGGTTGAATGAAAATGTAGACTTCGGAAGAGTGTTCTTGGCCGGGGACAGTGCTGGTGCCAACATAGTGCATAACTTAACTATGTTACTTGGGGACCCGGATTGGGACATTGGCATCGACATCCTAGGAGTTTGTCTCGTTCACCCGTATTTCTGGGGATCGGTTCCTTTGGGATCCGAGACCATGGATTTGGATAGGAGAGCTTTTGTGAACCGACTGTGGCCCTTTGTGTGTCCGGAGTCGCCGGACAATGATGACCCACGGATTAACCCGGTGGGGGAGGGATCACCGAGCTTGGCGTGGCTAGGGTGTAGGAGGGTGCTGATATGTGTGGCAGAGAAAGATGTGCTGAAGGAGAGAGGGTGGATTTACTACAGTGCTTTGAGTAAAAGTGGGTGGATGGGGGTGGTGGAAATTAAGGAGACTCAAGGGGAGGGTCATGCCTTTCATCTTTATGACTTGGCTTGTGACAAGGCTCAGGATTTGATCAAAAGCTTGGCTCGTTTCTTCAACAGAGATCAGCCTCCTTCAATTTAA 1011 0.546 MENSDTNTPTTAEAEVAHDFPGLIRVFTDGRIQRFKGTDVVPPSTPTTHPVSSKDVNLNPHSTLSARLFLPTPPSITTNRRRSLPLLVYFHGGGFCTSSPFTSTYHHYIAAVAAEAKLVAVSVQYRLAPEHPIPAAYEDSWAALQWVASHRSNAGPEPWLNENVDFGRVFLAGDSAGANIVHNLTMLLGDPDWDIGIDILGVCLVHPYFWGSVPLGSETMDLDRRAFVNRLWPFVCPESPDNDDPRINPVGEGSPSLAWLGCRRVLICVAEKDVLKERGWIYYSALSKSGWMGVVEIKETQGEGHAFHLYDLACDKAQDLIKSLARFFNRDQPPSI 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02968 336 Pfam alpha/beta hydrolase fold 87 308 IPR013094 GO:0016787
Vimu1g02968 336 Gene3D alpha/beta hydrolase 26 332 IPR029058 -
Vimu1g02968 336 MobiDBLite consensus disorder prediction 40 57 - -
Vimu1g02968 336 MobiDBLite consensus disorder prediction 37 57 - -
Vimu1g02968 336 SUPERFAMILY alpha/beta-Hydrolases 10 330 IPR029058 -
Vimu1g02968 336 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 169 181 IPR033140 -
Vimu1g02968 336 PANTHER ARYLACETAMIDE DEACETYLASE 20 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02968 Vimu-Chr1 42100770 42101780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02968 13 332 Carbohydrate Esterase AT3G48700 45.732 1.33e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02968 - - vra:106764914 679.478