Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02944 ATGAAGACTCTGCAAACCATTCTTCTTCTTCTGCTGCTGCTGACAGTGTTCTTTTGCAGCACCAACACCAAAGCAGAAGAAAAGAAAACACACCGCCAAGCCAAAAAGACCTACATAATCCACATGGACAAGTCCACCATGCCCTCAACTTTCTCCGACCACCTCAACTGGTTCGACTCCTCCCTTAAATCAGCATCAGCCACCGCAGAGATCCTCTACACCTATAAACACGTGGTTCACGGCTTCTCCACCAGGCTCACACCCCAAGAAGCAGAAACACTCGCCAACCGACCAGGAATCCTCTCAGTAACCCCAGAACTTCGATACAAACTCCACACCACAAGAACACCGCAGTTCCTCGGACTCGACAAAAGCACCACGATCTTACCCGCGTCCCAGCAACAGAGCCAGGTCATCATCGGAGTCCTTGACACCGGCGTCTGGCCCGAGTTGAAGAGCCTGGATGACACGGGCCTGGGTCCGGTACCCGCCACGTGGAAAGGCGAGTGCGAAGTTGGCAGCAACATGAACTCCTCACACTGCAACAGAAAACTAGTGGGTGCGAGGTTTTTCTCCAAAGGCTACGAATCCGCTCTTGGACCTGTTGACTTAAGTACAGAGTCAAAGTCAGCGAGAGACGACGAGGGGCATGGGAGTCACACGCTCACCACGGCTGCAGGCTCGGTGGTTCCCGAAGCTAGCTTCTACGGTTTGGCGTCGGGCACGGCTCGTGGAATGGCGCCGCAAGCGCGCGTAGCGGTTTACAAGGTGTGCTGGCTCGGTGGGTGTTTTTCTTCCGACATAGCCGCGGGGATCGACAAGGCCATAGAAGACGGCGTGAACGTTTTATCCATGTCGATTGGGGGAAGCTTGTTGGAGTATTACAGAGACATTATCGCGATTGGTACCTTCTCTGCCACGTCACACGGGATTTTAGTTTCCATGTCAGCAGGGAACGGTGGGCCCAGTTCGTCAACTCTATCCAACGTGGCACCGTGGATAACCACGGTGGGAGCGGGAACTTTAGACCGCGATTTCCCTGCTTACATAACGCTCGGAAACGGAAAAACATACACCGGAGCCTCGCTTTATAGCGGTAAACCGTTGCCGGATTCTCCGCTTCCTCTCGTTTACGCTGGCAACGCAAGTAACTCTTCTGTTGGGTATCTTTGCTTGCAAGATTCTCTCATTCCCGAGAAGGTTTCAGGGAAGATTGTGATATGCGAGAGAGGGGGAAATCCCAGAGTGGAAAAGGGTTTGGTGGTGAAGCTAGCGGGAGGTGCTGGAATGATTTTGGCCAACAATGAAGCTTACGGGGAAGAGTTAGTTGCTGACCCTCATCTTCTTCCTGCTGCATCGCTGGGCCAAAAATCAAGTCAAATTCTTAAGAGTTACGTTTCTTCTTCCGTAAATCCCACCGCTAAGATTGCTTTCGTAGGAACCCATTTGGAGGTTCAACCTTCTCCAGTTGTGGCGGCTTTCAGCTCCAGAGGACCCAACGCTCTCACGCCCAAGATTCTCAAACCGGATTTACTAGCTCCAGGGGTCAACATTTTAGCCGGTTGGACCGGCACGGTTGGACCGACCGGGTTGACCGCTGACGACCGCCATGTCAGCTTCAACATAATTTCCGGAACCTCCATGTCTTGCCCTCACGTCAGTGGCTTGGCCGCGATTGTCAAAGGCGCGCACCCTCAATGGAGCCCTGCGGCTATTAGATCCGCACTCATGACAACAGCGTACACGAGTTACAAAAACGGCGCCGCAATTGAAGATGTTGCGACTGGGCAACCTGCAACGCCGTTCGATTATGGCGCGGGACACGTGAATCCCGTGGCCGCCCTTGATCCTGGTCTGGTGTATGATGCGGACGTGGAAGACTACTTGGGATTCTTCTGCGCGATAAACTACACGTCGTTTCAAATCAAGCTTGCTGCGAGGAGGGACTTTACTTGTGACCCGAAGAGGGAATACAGAGTGGAGGATTTCAACTACCCTTCGTTTGCGGTTGCTTTGGAGACAGCTTCGGGGATTGGGGGTGGTTCGGATGCTCCCCATACTGTGAAGTACTCTAGGGTTTTGACTAACGTCGGAGCTCCGGGAACGTATAAAGCTTCGGTGGTGCCGCTGGGGGATTCGAATGTGAAGATTGTGGTGGAACCGGGGACGCTGAGTTTCGCGCAGGAGTACGAGAAGAAGAGCTATACGGTGTCGTTTACATACACCTCCAAGCCCTCCGGGACCAGTAGCTTTGCGCGTTTGGAATGGACGGATGGAAAACATAGGGTTGCCAGCCCAATTGCGTTCAGCTGGACATGA 2319 0.5326 MKTLQTILLLLLLLTVFFCSTNTKAEEKKTHRQAKKTYIIHMDKSTMPSTFSDHLNWFDSSLKSASATAEILYTYKHVVHGFSTRLTPQEAETLANRPGILSVTPELRYKLHTTRTPQFLGLDKSTTILPASQQQSQVIIGVLDTGVWPELKSLDDTGLGPVPATWKGECEVGSNMNSSHCNRKLVGARFFSKGYESALGPVDLSTESKSARDDEGHGSHTLTTAAGSVVPEASFYGLASGTARGMAPQARVAVYKVCWLGGCFSSDIAAGIDKAIEDGVNVLSMSIGGSLLEYYRDIIAIGTFSATSHGILVSMSAGNGGPSSSTLSNVAPWITTVGAGTLDRDFPAYITLGNGKTYTGASLYSGKPLPDSPLPLVYAGNASNSSVGYLCLQDSLIPEKVSGKIVICERGGNPRVEKGLVVKLAGGAGMILANNEAYGEELVADPHLLPAASLGQKSSQILKSYVSSSVNPTAKIAFVGTHLEVQPSPVVAAFSSRGPNALTPKILKPDLLAPGVNILAGWTGTVGPTGLTADDRHVSFNIISGTSMSCPHVSGLAAIVKGAHPQWSPAAIRSALMTTAYTSYKNGAAIEDVATGQPATPFDYGAGHVNPVAALDPGLVYDADVEDYLGFFCAINYTSFQIKLAARRDFTCDPKREYRVEDFNYPSFAVALETASGIGGGSDAPHTVKYSRVLTNVGAPGTYKASVVPLGDSNVKIVVEPGTLSFAQEYEKKSYTVSFTYTSKPSGTSSFARLEWTDGKHRVASPIAFSWT 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02944 772 SUPERFAMILY Subtilisin-like 111 619 IPR036852 GO:0004252|GO:0006508
Vimu1g02944 772 FunFam Subtilisin-like protease SBT1.5 137 353 - -
Vimu1g02944 772 Pfam Subtilase family 136 607 IPR000209 GO:0006508|GO:0008236
Vimu1g02944 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Vimu1g02944 772 CDD Peptidases_S8_3 109 581 IPR034197 -
Vimu1g02944 772 ProSiteProfiles Serine proteases, subtilase domain profile. 108 615 - -
Vimu1g02944 772 Pfam Peptidase inhibitor I9 37 112 IPR010259 -
Vimu1g02944 772 SUPERFAMILY PA domain 370 438 IPR046450 -
Vimu1g02944 772 Gene3D - 632 771 - -
Vimu1g02944 772 Pfam PA domain 375 459 IPR003137 -
Vimu1g02944 772 Gene3D - 343 483 - -
Vimu1g02944 772 FunFam subtilisin-like protease SBT1.5 343 483 - -
Vimu1g02944 772 Gene3D Peptidase S8/S53 domain 138 628 IPR036852 GO:0004252|GO:0006508
Vimu1g02944 772 FunFam Subtilisin-like protease SBT1.9 26 112 - -
Vimu1g02944 772 Pfam Fibronectin type-III domain 662 768 IPR041469 -
Vimu1g02944 772 CDD PA_subtilisin_like 349 476 - -
Vimu1g02944 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 768 IPR045051 -
Vimu1g02944 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 112 IPR037045 -
Vimu1g02944 772 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Vimu1g02944 772 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Vimu1g02944 772 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Vimu1g02944 772 SUPERFAMILY Protease propeptides/inhibitors 36 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02944 Vimu-Chr1 41787907 41791536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02944 10 772 Subtilisin-like Serine Gene Family AT5G67360 63.007 0.0 1000
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02944 - - gmx:100793808 1358.2