Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02809 ATGGGAAGACAACCACTAATCTTGGTAGCAGATCCAGAGCTTTGTAAAGAGGTGGGAATTAAGAAATTCAAAGACATTCCAAACAGAAGCATTCCCTCTCCTATTTCTGCCTCACCTCTTCATCAAAAAGGGCTCTTCTTCACCAGGGACTCACGATGGTCAACCATGAGAAACACCATATTGTCAGTGTATCAACCCTCACACTTGGCTAGTTTAGTGCCAATGATGCAATCATTCATAGAATCTGCAACAGAAAATCTTGACACCCCAAATGAGGACATGATCTTTTCTGATCTTTCCCTAAGACTAGCGACTGATGTGATTGGAGAGGCAGCATTTGGTGTCAACTTTGGCCTCTCTAAGCCCCATTCAGTCTGTGAATCAATCAAGAGTGTTAGCAGTGTGAAAAATGGTGATGATGATGATGATGAAGTATCAGATTTCATCAATCAACACATCTACTCCACAACACAACTTAAGATGGACTTGTCTGGTTCCTTCTCCATTATACTTGGTCTACTTGCTCCAATACTTCAGGAGCCATTTAGGCAGATTCTAAAGAGAATACCAGGCACAATGGACAGGAAAATAGAGAGTATTAATGAGAAACTGAGTGGTCGTCTTGATGAGATTGTCAAGAGGAGAATGGAGGACAAGAACCGAACTTCAAAAAACTTCTTATCACTAATTTTGAATGCAAGAGAATCAAAGCTTGTATCAGAAAATGTGTTTTCACCTGAATACATTAGTGCTGTTACTTATGAGCACTTACTTGCTGGGTCAGCTACCACAGCCTTTACCTTGTCATCCATTGTCTACTTGGTTGCTGGTCACCTAGAAGTTGAGAAAAAGTTACTTCAAGAGATTGATGAATTTGGTCCATCTGATAAGATTCCCACTGCCCAAGATCTGCATGATAGTTTTCCTTATCTTGATCAGGTGATTAAAGAGGCCATGAGGTTTTACACTGTCTCCCCGTTGGTTGCAAGAGAAACATCAAATGAGGTAGAGATAGGAGGTTACCTTCTTCCAAAGGGGACGTGGGTATGGTTAGCTATTGGAGTTTTAGCAAAAGATCCAAGAAATTTTCCTGATCCAGAGAAGTTTAAACCAGAGAGGTTTGACCCCAAGTGTGAAGAAATGAAACTAAGGCATCCTTATGCATTCATACCATTTGGAATTGGTCCTAGGGCATGTATTGGTCAGAAATTTTCCCTACAAGAGCTCAAGCTTACTCTGATTCATTTGTACCGAAAATATGTGTTTCGGCATTCCCTTAACATGGAAAAGCCTGTAGAAATGGAATATGGAATGGTTCTCAACTTCAAGCATGGTGTCAAGCTTAGAGTCATAAGAAGAACACAATAA 1368 0.405 MGRQPLILVADPELCKEVGIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSRWSTMRNTILSVYQPSHLASLVPMMQSFIESATENLDTPNEDMIFSDLSLRLATDVIGEAAFGVNFGLSKPHSVCESIKSVSSVKNGDDDDDEVSDFINQHIYSTTQLKMDLSGSFSIILGLLAPILQEPFRQILKRIPGTMDRKIESINEKLSGRLDEIVKRRMEDKNRTSKNFLSLILNARESKLVSENVFSPEYISAVTYEHLLAGSATTAFTLSSIVYLVAGHLEVEKKLLQEIDEFGPSDKIPTAQDLHDSFPYLDQVIKEAMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLAIGVLAKDPRNFPDPEKFKPERFDPKCEEMKLRHPYAFIPFGIGPRACIGQKFSLQELKLTLIHLYRKYVFRHSLNMEKPVEMEYGMVLNFKHGVKLRVIRRTQ 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02809 455 Pfam Cytochrome P450 1 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02809 455 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 392 401 IPR017972 GO:0005506|GO:0016705
Vimu1g02809 455 PRINTS E-class P450 group I signature 103 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02809 455 PRINTS E-class P450 group I signature 248 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02809 455 PRINTS E-class P450 group I signature 268 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02809 455 PRINTS E-class P450 group I signature 312 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02809 455 PRINTS E-class P450 group I signature 389 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02809 455 PRINTS E-class P450 group I signature 352 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02809 455 PRINTS E-class P450 group I signature 399 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02809 455 Gene3D Cytochrome P450 1 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02809 455 PRINTS P450 superfamily signature 259 276 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02809 455 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02809 455 PRINTS P450 superfamily signature 313 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02809 455 PRINTS P450 superfamily signature 390 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02809 455 SUPERFAMILY Cytochrome P450 1 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02809 455 PANTHER THROMBOXANE-A SYNTHASE 1 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02809 Vimu-Chr1 40392866 40394902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02809 1 453 Cytochrome P450 AT2G26170 71.965 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02809 K20771 - gmx:100805689 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02809 1 40392866 40394902 Vimu10g03142 10 42075917 42082681 PCT