Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02800 ATGTTTTCACCCAAAACAGGACGAGGAGTGCAAGGGGCAAAATCGTCTAGATCTCCTGGTGGGATTCCCCAACCATCTTCTGGTGGTCAGTGGGATAACATTGTCAAATTTTTGGATTCTCTCATGAGCAAACTTCGTGGAAATCATTCTGGTCTAGCAGAACTGGAGAAATGGATAGTTAATGCAAAGGAAGAGCTTCATGGGTTACTAAGTACTTCTGAAATGCAGTATGCAGGGACATCCTGGCATGAGCTCAATTACATACGACAAGCTGTTGGGTTCTTGGTAATACATCAGAAAAGAAAGAAATCTTTGGAAGAGATTCGGCAAGATCTTTGTCCGGCATTGACAGTAAGGCAAATCTATCGAATCAGTACAATGTACTGGGATGACAAGTATGGAACCCAAAGTGTGTCCAATGAGGCAAGTTTTGTGGTTAGTGTAATGAGAGAAATTGTCAGCAAGGACAATCAGAACCTGACCTCAAATTCTTTCTTATTGGATGATGATCTGAGCATTCCTTTCTCTGCTGAAGACATAGATATGGCTATCCCTGCCATAGATCTTGATGAGATTCATCTTCCAGAATTTGTTTTCTTATTTCACATCAGAAGTAGTGGTCTACGATTTCATGATCGCAACAACTGTCTGTGGTTGACAGTTTGGTTCAATATTTCGTCTCTGGATTTTCATGAGAATGCTAATACGGTATCTGCATTGGAAACACAAGTTTCTCTCACGTTACAGTGTGCGCTTGCTGTATATGATGCCAGATTGGTTCCTTTGTCACTTTGGCCTTTGATCGTTCTGTCACAATTCCAAGTACGAAGTTTTAAGATGACCATTAACTATGATATATGTGTTGATTTACCAAAGTGGGAAGCAGAAGAGGGAAGCGTTAGTGCTCTGAGGGCAATCCACATCATATCCTACTGA 936 0.4113 MFSPKTGRGVQGAKSSRSPGGIPQPSSGGQWDNIVKFLDSLMSKLRGNHSGLAELEKWIVNAKEELHGLLSTSEMQYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEASFVVSVMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAIPAIDLDEIHLPEFVFLFHIRSSGLRFHDRNNCLWLTVWFNISSLDFHENANTVSALETQVSLTLQCALAVYDARLVPLSLWPLIVLSQFQVRSFKMTINYDICVDLPKWEAEEGSVSALRAIHIISY 311
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02800 311 SMART DIL_2 35 134 IPR002710 -
Vimu1g02800 311 MobiDBLite consensus disorder prediction 9 28 - -
Vimu1g02800 311 MobiDBLite consensus disorder prediction 1 28 - -
Vimu1g02800 311 Pfam DIL domain 52 131 IPR002710 -
Vimu1g02800 311 ProSiteProfiles Dilute domain profile. 1 151 IPR002710 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu1g02800 Vimu-Chr1 40299803 40306945 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02800 3 198 Myosins gene family AT4G33200 59.072 1.90e-81 266
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02800 K10357 - gmx:100790815 289.271
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02800 1 40299803 40306945 Vimu10g03084 10 41685380 41708354 PCT