Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02797 ATGGATAGACAGCAAAAAGGGAGAGAACAAGTGATGGAGAAAAAGAAATCTGAAGAAATAAAGAAAAGACAAAGAATGGCAAAGAAAAGAAAGAAGTTTAAGGAAGAACAAAAAACAATATTAACTGGTTGCTGTAAAATGTTTTTTGAAAATCTTGATAGAGATCAGTCCGCTGTAGTTAAGGTTTCTGGCGTGGGTGGTTACTGGAGAAGTCTAGTTGGACTTGCTTGGCAACAGCTTCAGTGGTTTGCAGGAACTGTGATAAACAATGCCAAAAAGCTTCATATAGCAGATGATAATGGAAGTCAAAACTTCAATGCCATACTGGATGCAGAGAAGTATAAGTTAGGACATCCGAGTCACTTCCACTATCTAAATCAAAGTAAAATCTATGAATTAGATGGTGTAAGCAACTCAGAAGAATACCTCAAGACAAGGAGGGCAATGGATATTGTTGGCATTAGTCACCAGGATCAGTGTATTTCTTGCTTTACTATATGCTTCTGTGGTTCAATGGACAGTTTTACGATGGCCAGTGCTTTACTAATAGTCATCCCTTCTTCCTATTATCAGGATGCCATATTTCGTGTCTTAGCAGCAATTTTACATTTGGGAAACATTGAATTTTCTCCTGGAAAAGAGCATGACTCATCGGCAGTAAAGAATGACAAATCAAGATTTCATATGCAGATGGCTTCCGATCTTTTCATGTAG 714 0.3754 MDRQQKGREQVMEKKKSEEIKKRQRMAKKRKKFKEEQKTILTGCCKMFFENLDRDQSAVVKVSGVGGYWRSLVGLAWQQLQWFAGTVINNAKKLHIADDNGSQNFNAILDAEKYKLGHPSHFHYLNQSKIYELDGVSNSEEYLKTRRAMDIVGISHQDQCISCFTICFCGSMDSFTMASALLIVIPSSYYQDAIFRVLAAILHLGNIEFSPGKEHDSSAVKNDKSRFHMQMASDLFM 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02797 237 MobiDBLite consensus disorder prediction 1 20 - -
Vimu1g02797 237 PANTHER MYOSIN 111 159 - -
Vimu1g02797 237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 234 IPR027417 -
Vimu1g02797 237 MobiDBLite consensus disorder prediction 1 32 - -
Vimu1g02797 237 ProSiteProfiles Myosin motor domain profile. 1 237 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vimu1g02797 237 Gene3D - 101 153 - -
Vimu1g02797 237 Gene3D Myosin VI head, motor domain, U50 subdomain 189 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02797 Vimu-Chr1 40274609 40277934 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02797 110 236 Myosins gene family AT4G33200 55.906 1.27e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02797 K10357 - vum:124845124 179.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02797 1 40274609 40277934 Vimu1g02797 1 40274609 40277934 ECH
Vimu10g03084 10 41685380 41708354 Vimu1g02797 1 40274609 40277934 PCT