Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02764 ATGGCAAAGTTTGTGGATCCGAGGTTGAGGACTCAAATGACAGGGGTGGTGGGGACTTTCGGGTACCTTGCCCCAGAATACCTGAACGGGCGTAAGGCTAGCAAGGAATCAGACATTTATAGTTTTGGGGTTGTGGCTCTTGAGATCGCATGTGGAAGGAGAACTTACCATGATGGAGAATTTCATGTGCCTCTGATGAACTGGGTGTGGCAACAGTATGTGAAAGGGAACGTGATGGATGTTGTTGATGAGAGATTGAACAAAGAGTTCAATGTAGATGAAATGAGAAGTTTGATCATTGTGGGGTTGTGGTGTACTAACCCTAACGACAAGGAAAGGCCAAAGGCTGCACAAGTGATAAAAGTACTTGAACTAGAAGCGCCATTGCCAGAGCTTCCACTTGATATGCATGACCGTCTTCCTCCTTCTCTAGTTACATATTCAGAACAACCTAATTTTCAGTCCGTTCAGACACTACCTTTCACCGACAGCTTTATAAGTGTTGGACGTTAA 513 0.4483 MAKFVDPRLRTQMTGVVGTFGYLAPEYLNGRKASKESDIYSFGVVALEIACGRRTYHDGEFHVPLMNWVWQQYVKGNVMDVVDERLNKEFNVDEMRSLIIVGLWCTNPNDKERPKAAQVIKVLELEAPLPELPLDMHDRLPPSLVTYSEQPNFQSVQTLPFTDSFISVGR 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02764 170 Gene3D Transferase(Phosphotransferase) domain 1 1 139 - -
Vimu1g02764 170 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu1g02764 170 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 2 130 - -
Vimu1g02764 170 Pfam Protein kinase domain 11 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu1g02764 170 SUPERFAMILY Protein kinase-like (PK-like) 2 156 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02764 Vimu-Chr1 39891592 39894974 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02764 1 136 Receptor kinase-like Gene Family AT5G10530 47.518 5.81e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vimu1g02764 Pkinase 1.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02764 - - vra:106763732 290.426