Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02763 ATGAGAATGAGGTTGCTAGAGATGGTGACAACTTTTGTTCTTCTGCTGCTTCTTCATCCTCCTTTTCTTAAAACTGTAGAATCACTAAATTTCAACATAACAAACTTCAACGATCCTGAGAGTGAAAAAAACATGGCATACATAGGTGATGGCAAAGCCAGCAACGGCAGTGTAGAACTCAACATTGTGGACTATCTTTTCCGCGTTGGAAGAGCCTTGTACGCAAAACCTCTGCACCTGTGGGACCAATCATCGAATGTTCTCACAGACTTCACCACACACTTCACTTTCTCCATTGACAGAGCCAAAAACGGCACCTATGCTGACGGTTTCGCCTTCTACATGGCCCCTCATGGCTACCCGATTCCTCCCAACTCAGGTGGTGGCACTTTTGCCCTTTTCAACACCACCTCCAACACCTTTATTCGCCACAACCACGTCCTCGCTGTTGAGTTTGACACGTTCAATGGCACCATTGACCCTCCCATGCAGCACGTTGGCATAGACGATAACTCTCTCAGCTCCGTGACTTCTGCCAAATTTGACATTGACAAAAACCTGGGAAAGAAATGTAACGTTTTGATAACCTACACAGCTTCCAACAAGACCCTCTTTGTGGCTTGGTCCTTCAACGGAACACCAACCTCACACTCCAATTCTTCACTTTCTTACACGGTTGACCTCATGGAAATTCTACCAGAGTGGGTGGATGTGGGGTTCTCCGCTTCAACAGGCGAATTCACTGAACACAATGTTATTTACACCTGGGACTTTAGTTCAACGTTGAATTCCGATGCTTCGGATAATTCCTCCGGTGGGGACGGGAACGGAAAACGAAACGTTTGGGTAATTGCTGTGGCGACTTCTTCGGCGGTCTTGGTGGCCGTGGTTGTGAGTGTTGCAGTCTGGGCAATAATGAAGAAGAAAAGAAGGGATAAGGTTGATAAGAGTAATGATGGTGAAGGTGGAGCCAACTTGGTTAAGTTTGATTTGGATAGAGCAACTATACCAAGAAGATTTGATTACAGAGAATTACTTGCAGCCACCAACGGATTCGCAGATGATAGAAAGCTTGGGCGAGGAGCTTCGGGACAGGTTTACAAAGGGGTTCTGAGTGATTTGGGGAGGGTTGTTGCGGTGAAAAGGATTTTCGCTAAGTTTGCAAATTCAGAGAGAGTTTTCATCAATGAGGTTAGGGTTATAAGCCGTCTTATACACAGAAACTTGGTGCAGTTCGTAGGGTGGTGCCACGAGCAAGGTGAGTTTCTGTTGCTTTTTGAGTACATGCCTAATGGAAGCCTCGACACTCATCTCTTTGGGGACAAAAAACCTTTGACCTGGGATGTTAGGTGA 1353 0.4597 MRMRLLEMVTTFVLLLLLHPPFLKTVESLNFNITNFNDPESEKNMAYIGDGKASNGSVELNIVDYLFRVGRALYAKPLHLWDQSSNVLTDFTTHFTFSIDRAKNGTYADGFAFYMAPHGYPIPPNSGGGTFALFNTTSNTFIRHNHVLAVEFDTFNGTIDPPMQHVGIDDNSLSSVTSAKFDIDKNLGKKCNVLITYTASNKTLFVAWSFNGTPTSHSNSSLSYTVDLMEILPEWVDVGFSASTGEFTEHNVIYTWDFSSTLNSDASDNSSGGDGNGKRNVWVIAVATSSAVLVAVVVSVAVWAIMKKKRRDKVDKSNDGEGGANLVKFDLDRATIPRRFDYRELLAATNGFADDRKLGRGASGQVYKGVLSDLGRVVAVKRIFAKFANSERVFINEVRVISRLIHRNLVQFVGWCHEQGEFLLLFEYMPNGSLDTHLFGDKKPLTWDVR 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02763 450 PANTHER - 55 450 - -
Vimu1g02763 450 Gene3D Phosphorylase Kinase; domain 1 323 428 - -
Vimu1g02763 450 ProSitePatterns Legume lectins alpha-chain signature. 232 241 IPR000985 -
Vimu1g02763 450 CDD lectin_legume_LecRK_Arcelin_ConA 29 262 IPR001220 GO:0030246
Vimu1g02763 450 ProSitePatterns Legume lectins beta-chain signature. 148 154 IPR019825 -
Vimu1g02763 450 ProSiteProfiles Protein kinase domain profile. 352 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu1g02763 450 SUPERFAMILY Protein kinase-like (PK-like) 335 449 IPR011009 -
Vimu1g02763 450 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Vimu1g02763 450 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 266 IPR013320 -
Vimu1g02763 450 Gene3D - 26 273 - -
Vimu1g02763 450 FunFam L-type lectin-domain containing receptor kinase IX.1 337 428 - -
Vimu1g02763 450 Pfam Protein kinase domain 353 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu1g02763 450 Pfam Legume lectin domain 28 269 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02763 Vimu-Chr1 39888797 39890149 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02763 8 450 Receptor kinase-like Gene Family AT5G10530 40.848 3.41e-101 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vimu1g02763 Lectin_legB 4.7e-65 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02763 - - vra:106763732 763.451