Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02675 ATGGATGACATTGTACCAATCAAGACAGGGAAGATAGTGAAGCCCAGACCTGTCCAGGCAGCTAGCATCCCTGGCATGCTTGGAATGTTGCAAAATGTATGCAATTTAGGCTATGAAGTATTCTTTATGATTTTTGGAATGGGATGGGTTGATGCTATCAAATTTTGCATTGGAGCAAAAATTGCACACGACAAGGCAAGAGCTGAGTCATGCTCTCTACCAGGTTTTGGAGTTAACATAGTGACTGTTGTTATGGTTGTTGTGCTTGGATTTAGTCAGAAGATTGATCGAAGGTCAGATGGCCAAATGACCTTTCTAGAAAAAATAGTCCTGGAATTTATACCAGCTGTTGGAGCATGTCTTTCAATTGCAGACATAGTTTTTCTGTGGAAGAAAGAGCATAGTAGTCACATTGTTGGATATCATAAATGGTTCTATAGTTGTTCTGAGTTGATGGTGCGAGTTTTAATTTGCATCACGGAAAGCTTAGTTGTTCTCTTGAATATCTCATTTGGCATAGCCATCAATGTGATAAGGATAAAGAGACCATCTTACAAAAACAGGTATATACTGGCACGTGTTTCTTACACCACACATTTTTTGGAGGATCCATTTCTTTCGAATGGTGTGGACCTTGAGGAAGGTGGTTATCAAGACCTTGAAAATGATGGAAACTTTTGGGATTTGATGACTTTCAACTTCATAACTCCAGTAATGACCTATTGA 726 0.3912 MDDIVPIKTGKIVKPRPVQAASIPGMLGMLQNVCNLGYEVFFMIFGMGWVDAIKFCIGAKIAHDKARAESCSLPGFGVNIVTVVMVVVLGFSQKIDRRSDGQMTFLEKIVLEFIPAVGACLSIADIVFLWKKEHSSHIVGYHKWFYSCSELMVRVLICITESLVVLLNISFGIAINVIRIKRPSYKNRYILARVSYTTHFLEDPFLSNGVDLEEGGYQDLENDGNFWDLMTFNFITPVMTY 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02675 241 PANTHER PRE-MRNA-PROCESSING FACTOR 19 1 32 IPR038959 GO:0000398|GO:0000974|GO:0006281|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02675 Vimu-Chr1 38650610 38654217 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02675 1 31 U-box Gene Family AT1G04510 74.194 1.91e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02675 K05674 - gmx:100814181 201.445