Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu1g02656 | ATGAAAACGAAGCTTCTTCTTTTGCTTCTCATGCTCCTCCTTATGCTCCACAAACCCATTTGGACTCTTGCCTCTCCATACCCTTTTGCTTCCTCGCCTCAAGTTCCACTCTTTTCTCCATTTCCCAATTCAATGTCTGCTTCCTCTCCAGGAATTGTGATGGGGGCTGAACAGCGGCAAATGGATTCGCACAAGAAAATGGTAATTGCCATTGCCATAGCCAGCACTTCACTTGGTGCAGTCATTTTGAGTGTGTTTTGCATCTGGATTTATCATACCAAGTATCCTTCAAAATCCAAAGGGAAAAACGTTCAAAGATCAGATGCTGAGAAAGGGCCAGCTTCAGCACCAACTCTGAGTAAATTCAGCTCTATAAAGCTGGTTGGTACGAAAGGGTGTGTTCCAATAATTGATTATAAGCAAATAGAAAAAGCCACCGGCAATTACAAGGAAAGTAACATCTTAGGTGAGGGAGGTTTTGGATGTGTTTACAAAGCACATTTGGATGATAATTTGGAAGTTGCCGTTAAGAAATTGCACTGTGAAAATCCGTGTGCTGAGCAAGAATTTGAGAACGAGGTGGAATTGTTAAGTAAAATTCAACATCCAAATGTAATTTCTATGCTGGGATGTAGCAGTAATGAAGCTACAAGGATTATTGTCTATGAATTGATGCACAATGGATCATTGGAAACACAATTACATGGACCTTCTCATGGCTCAGCATTGCCTTGGCATTTGAGGATGAAGATTGCTCTTGACACAGCAAGGGGATTAAAATATCTGCATGAACACTGTTATCCTGCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATGCAAAGTTCAATGCTAAGCTTTCTGATTTTGGCCTTGCCATAACCAATGGGACCCAAAACAAGAATAATATCAAGCTTTCAGGCACGTTGGGTTACGTAGCCCCGGAGTATCTTTTAGATGGTAAATTGACTGATAAAAGTGATGTATATGCTTTTGGAGTTGTTCTGCTGGAGCTTCTCTTGGGAAAGAAGCCTGTGGAAAAACTAGCACCAGCTCAATGCCAATCCATTGTCACATGGGCCATGCCACAGCTCACAGACAGATCTAAACTTCCAAACATCGTGGATCCTGTAATTAAGGATACAATGGACCCCAAACACTTGTACCAGGTTGCTGCAGTGGCCGTGCTGTGCGTGCAACCAGAGCCAAGTTACCGTCCCCTAATTGCAGATGTTCTCCACTCACTCATTCCTCTTGTCCCTGTAGAGCTTGGAGGAACACTTAAAGTAGCACAGCTGCCACAGCAAGTATTACCTGCTAACCCACATGAGGATTCTAGTCCATGA | 1356 | 0.4255 | MKTKLLLLLLMLLLMLHKPIWTLASPYPFASSPQVPLFSPFPNSMSASSPGIVMGAEQRQMDSHKKMVIAIAIASTSLGAVILSVFCIWIYHTKYPSKSKGKNVQRSDAEKGPASAPTLSKFSSIKLVGTKGCVPIIDYKQIEKATGNYKESNILGEGGFGCVYKAHLDDNLEVAVKKLHCENPCAEQEFENEVELLSKIQHPNVISMLGCSSNEATRIIVYELMHNGSLETQLHGPSHGSALPWHLRMKIALDTARGLKYLHEHCYPAVIHRDLKSSNILLDAKFNAKLSDFGLAITNGTQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGKKPVEKLAPAQCQSIVTWAMPQLTDRSKLPNIVDPVIKDTMDPKHLYQVAAVAVLCVQPEPSYRPLIADVLHSLIPLVPVELGGTLKVAQLPQQVLPANPHEDSSP | 451 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu1g02656 | 451 | FunFam | Protein kinase superfamily protein | 116 | 224 | - | - | |
Vimu1g02656 | 451 | MobiDBLite | consensus disorder prediction | 98 | 117 | - | - | |
Vimu1g02656 | 451 | Pfam | Protein kinase domain | 149 | 417 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu1g02656 | 451 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 270 | 282 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu1g02656 | 451 | Gene3D | Transferase(Phosphotransferase) domain 1 | 225 | 424 | - | - | |
Vimu1g02656 | 451 | SUPERFAMILY | Protein kinase-like (PK-like) | 129 | 419 | IPR011009 | - | |
Vimu1g02656 | 451 | FunFam | probable receptor-like protein kinase At1g80640 | 225 | 424 | - | - | |
Vimu1g02656 | 451 | CDD | STKc_IRAK | 155 | 422 | - | - | |
Vimu1g02656 | 451 | ProSitePatterns | Protein kinases ATP-binding region signature. | 155 | 178 | IPR017441 | GO:0005524 | |
Vimu1g02656 | 451 | PANTHER | OS01G0750732 PROTEIN | 54 | 422 | - | - | |
Vimu1g02656 | 451 | Gene3D | Phosphorylase Kinase; domain 1 | 115 | 224 | - | - | |
Vimu1g02656 | 451 | ProSiteProfiles | Protein kinase domain profile. | 149 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu1g02656 | 451 | SMART | serkin_6 | 149 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu1g02656 | Vimu-Chr1 | 38372114 | 38377852 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu1g02656 | 11 | 365 | Receptor kinase-like Gene Family | AT1G80640 | 45.283 | 6.18e-101 | 304 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-X | Vimu1g02656 | Pkinase | 1.3e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu1g02656 | - | - | vra:106764755 | 874.389 |