Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02623 ATGTTTGTCCTGGAGAATGGTGCCAAGAAGGGGGAAGAACCAAGGCTTCAAGCCATCTCCCAAGCCATCAGAGTCGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACAACATTGTTGCTGGATCACAAAGCCTTCAAACACGCGGTTGACATTTTTGTTCATCGTTACAGAGACATGGATATTTCTGTTGTTGCTGGGGTTGAAGCCAGGGGATTCATTTTTGGTTCCTCTATTGCGTTAGGCATTGATGCCAAGTTTGTTCCTTTATGCAAACCTGGGAAGCTGCCAGGGGAAGTAATTTCTGAAAAATATGTTCTAGAATATGGCACTGATTGTTTGGAGTTGCATGTTGGGGCTGTTCAGTCCAGTGAACGTGTCATAATTATTGATGATTTGGTGGCCACAGGTGGAACTCTATCAGCAGCAATTAGACTTCTAGAACTTGCTGGTGCTGAAGTAGTGGAGTGTGCTTGTGTGATTGGTCTCTCTGATCTCAAGGTACGAAGCAAGCTTAATGGAAAGCCACTTTATATCCTTTTGGAGCCACGTCAAGTAGAAAATGGTCATTGA 582 0.4381 MFVLENGAKKGEEPRLQAISQAIRVVPHFPKQGIMFQDITTLLLDHKAFKHAVDIFVHRYRDMDISVVAGVEARGFIFGSSIALGIDAKFVPLCKPGKLPGEVISEKYVLEYGTDCLELHVGAVQSSERVIIIDDLVATGGTLSAAIRLLELAGAEVVECACVIGLSDLKVRSKLNGKPLYILLEPRQVENGH 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02623 193 CDD PRTases_typeI 52 185 IPR000836 -
Vimu1g02623 193 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 186 - -
Vimu1g02623 193 Hamap Adenine phosphoribosyltransferase [apt]. 19 186 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vimu1g02623 193 Gene3D - 6 186 IPR029057 -
Vimu1g02623 193 NCBIfam adenine phosphoribosyltransferase 20 185 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vimu1g02623 193 SUPERFAMILY PRTase-like 22 178 IPR029057 -
Vimu1g02623 193 FunFam Adenine phosphoribosyltransferase 1 7 186 - -
Vimu1g02623 193 Pfam Phosphoribosyl transferase domain 45 164 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02623 Vimu-Chr1 37924996 37928468 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02623 12 185 PRT Gene Family AT1G27450 65.517 5.80e-80 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02623 K00759 - gmx:100818276 345.895