Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02602 ATGTCTATAATAGCAGAAGCACCTAAATTTCTTCAAGTTTACTCAAATGGTTCTGTGAAACGCTTCGGCCCAGAAACTGCCTTAGCCTCCTTAGAATCAACCAATGGGTACAAATCAAAGGATGTGATCATAGACTCATCAAAAGGTATCACAGGAAGAATCTTCCTTCCAAGTTTTCCAATTTCCTCAAAGAAACTTCCTCTCGTGGTTTATTTCCATGGTGGTGGCTTCTGCATTGGATCTACCACATGGCTTGGCTACCACACTTTTCTTGGTGACTTCTCTGTCACATCTCAGTCCATTATCCTTTCTGTTGACTATCGTTTGGCTCCAGAACACCGTCTCCCTATTGCCTATGAAGATTGCTACACCTCACTTCAATGGCTAAGTGAAAAAGTTGCTTCTGAATCTTTGCTTCAACAAGCTGACACAAGTAGGGTTTTTCTCTCAGGAGATAGTGCAGGAGGTAACATTGCACATCATGTTGCAGTGAAGGCAATTCAAAGCCATGCATGCCCTTTGAGAATCACTGGGTTGATGCCAATACATCCCTATTTTGGAAGTGAAAAAAGGACCGTGAAAGAGATGGTTGATGAAAGCAAAGAGGATGTAACCATGAATGATATGTTTTGGAGGCTGAGTATACCAGAAGGCTCAAACCGTGACTACTATGGTTGTAACTTTGAAAAACATGACCTAGGTAACACTGTTTGGCTTAAATTTCCACCAACTGAGGTTTATGTTGCTGGTGAAGATTTTCTGAAGGAACGAGGAGTGATGTATGTCGAGTTTCTAAAGAACAAAGGAGTGAAAAAGGTGACACTTGTGGAAGCAAAGGAAGAGTCTCATGTATTTCATGTATATCATCCTCTATCTCCTGCAACTCGTTCACTGCAAACTCAAATGACTACATTCATAGAAAAATATTAG 930 0.4086 MSIIAEAPKFLQVYSNGSVKRFGPETALASLESTNGYKSKDVIIDSSKGITGRIFLPSFPISSKKLPLVVYFHGGGFCIGSTTWLGYHTFLGDFSVTSQSIILSVDYRLAPEHRLPIAYEDCYTSLQWLSEKVASESLLQQADTSRVFLSGDSAGGNIAHHVAVKAIQSHACPLRITGLMPIHPYFGSEKRTVKEMVDESKEDVTMNDMFWRLSIPEGSNRDYYGCNFEKHDLGNTVWLKFPPTEVYVAGEDFLKERGVMYVEFLKNKGVKKVTLVEAKEESHVFHVYHPLSPATRSLQTQMTTFIEKY 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02602 309 PANTHER ARYLACETAMIDE DEACETYLASE 8 290 - -
Vimu1g02602 309 Pfam alpha/beta hydrolase fold 69 286 IPR013094 GO:0016787
Vimu1g02602 309 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 147 159 IPR033140 -
Vimu1g02602 309 Gene3D alpha/beta hydrolase 9 307 IPR029058 -
Vimu1g02602 309 SUPERFAMILY alpha/beta-Hydrolases 37 309 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02602 Vimu-Chr1 37554517 37555446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02602 3 287 Carbohydrate Esterase AT5G16080 36.913 1.51e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02602 - - gmx:106796748 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02602 1 37554517 37555446 Vimu1g02602 1 37554517 37555446 ECH