Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02594 ATGATGCATCTCCAGCTAGGAGAGATCTTCATTATCGTTGTTTCCTCAGCAGAGTATGCCAAAGAGATCATGAAAACACATGATGCAACCTTTGCATCGAGACCTAAACTTCTGGCAGCAGATATAGCCTCTTATGGATACACAAACATTGCTTTTGCACCTTACGGAAGTTACTGGAAAACGGTACGAAGAATCTGCACCATGGAGCTTCTGTCCCCAAAACGTGTCAGGTCCCCCGTCAACCTCACTGAAGCAGTGTCCTTATCAATGTATAATATCATTTCAAGAGCTGCTCTGGGGCAGAAGCGCACCAAAGACCACGATGAGTTCATGTCGATAGTCCAACATGCAGTGCTTGGTGCAGGAGGTTTTGACATAGGAGAGTTGTTTCCTTCTACTACATGGCTTCAACATCTCACTGGTTTGAGGCCTATGCTTGAGAAGGTGCATCAACAGATCGATCGGATACTGGAAGCCATAATCAATGAACACAGAGAAGCAAGGTCCAAAACCCAACATGGCCGTGAATCAGTCGAAGATTTGGTAGATGTTCTCCTAAACTTCCATGATGCTAATGACAGTAACCATGAAGTTTGCTTAACCATTGACAATATCAAAGCAGTAATGACGGACATTTTTTTAGCTGGATTTGAGACTGTGAAAACTACCATAGATTGGGCAATGGCAGAGATGATGAGGAATCCAAGAGTGATGAAGAAAGCACAAGATGAGGTGAGAGAGGTGTTTAAAGAAAAGGGAAGGGTTGATGAGATTTGCATGAATGAACTACAATACTTGAAATCAGTTGTGAAAGAAACCCTAAGGTTACACCCACCAGGAGTTCTTCTGATTCCAAGAGAATGTGCAGAGAGATGTGAGATTGATGGGTATGAGATACCAGCCAAATGCAAGGTATTGATAAATGCTTGGGCAATTGGGAGAGACCCAAAGTACTGGAGTGAAGCTGAGAGGTTTTATCCAGAGAGATTCATTGGCAGTTCCATTGATCTTAAAGGGAATCATTTTGAGTTCATTCCCTTTGGTGCTGGAAGAAGAATCTGTCCTGGCATTTCCTTTGGCTTGCTAAATGTTGAACTCACTCTTGCTGTCTTGTTGTTTCACTTTGATTGGAACCTTCCTAATGGAATCAAAACTGATGACTTTGACATGACTGAGAAATTTGGAATCACTGTTGGATTAAAGAATGACGTTTTCTTGATACCTCTCACTGCTGGTAAGATATATTTCTTTGCTAAATCATATTATCTCATAACCATCATAATCTCACTCTTAACTAAATAA 1302 0.414 MMHLQLGEIFIIVVSSAEYAKEIMKTHDATFASRPKLLAADIASYGYTNIAFAPYGSYWKTVRRICTMELLSPKRVRSPVNLTEAVSLSMYNIISRAALGQKRTKDHDEFMSIVQHAVLGAGGFDIGELFPSTTWLQHLTGLRPMLEKVHQQIDRILEAIINEHREARSKTQHGRESVEDLVDVLLNFHDANDSNHEVCLTIDNIKAVMTDIFLAGFETVKTTIDWAMAEMMRNPRVMKKAQDEVREVFKEKGRVDEICMNELQYLKSVVKETLRLHPPGVLLIPRECAERCEIDGYEIPAKCKVLINAWAIGRDPKYWSEAERFYPERFIGSSIDLKGNHFEFIPFGAGRRICPGISFGLLNVELTLAVLLFHFDWNLPNGIKTDDFDMTEKFGITVGLKNDVFLIPLTAGKIYFFAKSYYLITIIISLLTK 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02594 433 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 347 356 IPR017972 GO:0005506|GO:0016705
Vimu1g02594 433 PANTHER OS08G0105600 PROTEIN 1 79 - -
Vimu1g02594 433 Gene3D Cytochrome P450 1 405 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02594 433 Pfam Cytochrome P450 78 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02594 433 Pfam Cytochrome P450 2 75 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02594 433 SUPERFAMILY Cytochrome P450 2 407 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02594 433 CDD CYP71-like 2 403 - -
Vimu1g02594 433 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02594 433 PRINTS P450 superfamily signature 345 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02594 433 PRINTS P450 superfamily signature 215 232 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02594 433 PRINTS P450 superfamily signature 268 279 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02594 433 FunFam Os06g0641600 protein 103 407 - -
Vimu1g02594 433 PRINTS E-class P450 group I signature 204 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02594 433 PRINTS E-class P450 group I signature 344 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02594 433 PRINTS E-class P450 group I signature 19 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02594 433 PRINTS E-class P450 group I signature 308 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02594 433 PRINTS E-class P450 group I signature 354 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02594 433 PRINTS E-class P450 group I signature 224 250 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02594 433 PRINTS E-class P450 group I signature 267 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02594 Vimu-Chr1 37464446 37466084 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02594 1 408 Cytochrome P450 AT3G26330 40.367 4.80e-113 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02594 - - gmx:100818508 574.704