Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu1g02570 | ATGTCTTCGACGATTGTGGCATATTCGAGTTCTTGGAGCAGGGCACTTGTCGCGATCTCGCCCTACACCTTCGCCGCCATCGGTATCGCGGTCGCAATCGGCGTCTCCGTCCTCGGCGCCGCCTGGGGGATCTACATCACCGGTAGTAGCTTGATCGGCGCTGCAATCAAGGCTCCTCGAATCACTTCCAAAAATCTCATTAGTGTGCAGGTGAGAGAGGCGAGGTGTGAATGCATACCCATTGCAGTATTACAAGTTTACAAATTACAATTGCACAGCGGCGGTGCTTTTGCTGGGTATTGGGCATTAGTCTCACCCCGCATAATAAGCAGTGATAATCTTTCTTCATCATTGGGAGTAAGTGATCCTGTTGCTATATATGGTGTTATTGTGGCTATTATTCTTCAAACAAAATTAGAAAGTGTTCCAACAGAAAATATCTACGACCCAGAGTCTCTTAGGGCTGGATATGCAATCTTTGCTTCTGGATTAATCGTGGGCTTCGCAAATCTTGTTTGTGGGGGGGACCTTTTCCATGTTGTTGTCACATTCAATTTTTTCCCCTCTGGCAGGTTGTGTGTAGGAATAATCGGAAGCAGCTGTGCTTTATCTGATGCTCAGAATTCCTCCCTCTTCGTGAAAATTCTTGTGATTGAGATCTTTGGTAGCGCGCTTGGGCTATTTGGAGTGATTGTTGGAATTATTATGTCAGCACAGGCAACATGGCCAACAAAAGTTTAG | 741 | 0.4629 | MSSTIVAYSSSWSRALVAISPYTFAAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVQVREARCECIPIAVLQVYKLQLHSGGAFAGYWALVSPRIISSDNLSSSLGVSDPVAIYGVIVAIILQTKLESVPTENIYDPESLRAGYAIFASGLIVGFANLVCGGDLFHVVVTFNFFPSGRLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTKV | 246 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu1g02570 | 246 | Pfam | ATP synthase subunit C | 160 | 236 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Vimu1g02570 | 246 | Pfam | ATP synthase subunit C | 27 | 69 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Vimu1g02570 | 246 | Gene3D | - | 188 | 243 | IPR035921 | - | |
Vimu1g02570 | 246 | Gene3D | - | 91 | 184 | IPR035921 | - | |
Vimu1g02570 | 246 | SUPERFAMILY | F1F0 ATP synthase subunit C | 20 | 74 | IPR035921 | - | |
Vimu1g02570 | 246 | SUPERFAMILY | F1F0 ATP synthase subunit C | 152 | 237 | IPR035921 | - | |
Vimu1g02570 | 246 | CDD | ATP-synt_Vo_c_ATP6F_rpt2 | 155 | 236 | - | - | |
Vimu1g02570 | 246 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 192 | 240 | - | - | |
Vimu1g02570 | 246 | Gene3D | F1F0 ATP synthase subunit C | 22 | 83 | IPR038662 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu1g02570 | Vimu-Chr1 | 37131754 | 37134266 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu1g02570 | 6 | 245 | Primary Pumps ATPases(2) | AT4G32530 | 60.870 | 8.47e-84 | 247 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu1g02570 | K03661 | - | gmx:100778175 | 268.855 |