Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02534 ATGGCAATGGCATACGAAAACCCTCCTTCGATTCCAATATCAGATCCTGAAGCACAGGAAATCACTCCGACGCCTACTCCTTCCACCGGCGCACCAGGCAAAGGTTACTCAGCCAAAGTGGTGGTGAACAAAGTGAAGAACAATCTTGTTTTTCATTCAAAATGGGGTGAACTGAACGGTGCCATGGGTGATCTTGGTACCTATATACCAATAGTGTTGGCCTTGACCCTTGCCAGGGACCTCAACCTTGGCACCACACTCATCTTCACAGGTGTGTACAACATCATCACCGGAGCCATCTATGGCGTCCCCATGCCAGTCCAGCCCATGAAATCCATTGCTGCTCAGGCCTTGTCGGACAAAACCTTCGGCGTGCCGGAGATCATGGCTGCCGGTATAATAACCGGTGGGGTGCTGTTTGTTCTGGGTGTGACAGGGTTGATGCGGCTTGTGTACATGTTCATTCCTCTGTGTGTTGTGAGGGGAATTCAGCTGGCACAAGGCTTGTCTTTTGCTCTCACAGCAGTTAAGTATGTGAGGAAAATTCAGGACTTGCCAAAGAGTAAATCTTTGGGTGAGAGACACTGGCTTGGGTTGGATGGGCTGGTTTTGGCTATTGTGTGTTTGTGTTTCATTGTGATAGTGAATGGGGCTGGGGAGAAGAATAGAGGGTGCTGTGATGGTGTGCAAAGTGGGGGTGATGATTTGGGTGGTGGCCAAAAGAGGGATGAGGTTGCAAGAACCAAGACAAGCAGGTTGAGAAGGGTTATTTTCTCACTACCTTCTGCTTTCATGGTGTTTGTGTTGGGGGTTGTTTTGGCCTTTGTGAGGAGGCATGAGGTGGTGCATGAGATAAAGTTTGGACCATCATCAATAGATGTGGTGAAGTTCTCTAAACATGCATGGAAGAGAGGGTTTGTGAAGGGTGCAATTCCTCAACTTCCATTGTCAATTTTGAACTCTGTGGTGGCTGTTTGTAAGTTGTCATCAGATTTGTTCCCAGGGAGGGATTTCTCAGTGACTTCATTGTCAGTGACAGTGGGGTTGATGAACTTGGTTGGAAGTTGGTTTGGTGCAATGCCAAGTTGCCATGGTGCTGGTGGACTTGCAGGGCAGTACAAGTTTGGTGGTAGGAGTGGTGGTTGTGTGGCACTTCTTGGTGTTGCAAAACTGGCCTTGGGGTTGGTGTTGGGAAGTTCTTTGGCACACATTTTAAGGCAATTTCCAGTGGGATTATTAGGGGTCTTGCTACTGTTTGCTGGAATAGAACTAGCTATGTGTTGTAGGGACATGAACACAAAGGAAGATTCCTTTGTGATGCTTATTTGCACTGCAGTTTCACTTGTTGGATCAAGTGCAGCTCTTGGCTTTTTATGTGGAATGATTATTTATGTCCTTCTTAGGTTGAGGCATTGGACAAGAGACAAACCACTTTCTGCTATTTGGATGCAGAAAAGTCCTGAACAAGTCTGA 1473 0.4711 MAMAYENPPSIPISDPEAQEITPTPTPSTGAPGKGYSAKVVVNKVKNNLVFHSKWGELNGAMGDLGTYIPIVLALTLARDLNLGTTLIFTGVYNIITGAIYGVPMPVQPMKSIAAQALSDKTFGVPEIMAAGIITGGVLFVLGVTGLMRLVYMFIPLCVVRGIQLAQGLSFALTAVKYVRKIQDLPKSKSLGERHWLGLDGLVLAIVCLCFIVIVNGAGEKNRGCCDGVQSGGDDLGGGQKRDEVARTKTSRLRRVIFSLPSAFMVFVLGVVLAFVRRHEVVHEIKFGPSSIDVVKFSKHAWKRGFVKGAIPQLPLSILNSVVAVCKLSSDLFPGRDFSVTSLSVTVGLMNLVGSWFGAMPSCHGAGGLAGQYKFGGRSGGCVALLGVAKLALGLVLGSSLAHILRQFPVGLLGVLLLFAGIELAMCCRDMNTKEDSFVMLICTAVSLVGSSAALGFLCGMIIYVLLRLRHWTRDKPLSAIWMQKSPEQV 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02534 490 PANTHER - 39 477 IPR031563 GO:0015098|GO:0015689
Vimu1g02534 490 MobiDBLite consensus disorder prediction 17 31 - -
Vimu1g02534 490 MobiDBLite consensus disorder prediction 1 33 - -
Vimu1g02534 490 Pfam Molybdate transporter of MFS superfamily 56 171 IPR031563 GO:0015098|GO:0015689
Vimu1g02534 490 Pfam Molybdate transporter of MFS superfamily 306 424 IPR031563 GO:0015098|GO:0015689
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02534 Vimu-Chr1 36689677 36691687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02534 17 479 Inorganic Solute Cotransporters AT2G25680 64.301 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02534 - - vun:114195568 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02534 1 36689677 36691687 Vimu1g02534 1 36689677 36691687 ECH
Vimu1g02534 1 36689677 36691687 Vimu10g02875 10 39937875 39939653 PCT