Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02515 ATGGTTTCACCAAAATCCCCGCCAAAAACACTAAGGTTGTACCCTGTTGCACCTTTGCTGGTACCTCGTGAGTGTAGAGAAGATGTTACTATAGATGGTTACTACATAAAGAAAAAGTCAAGAGTGATAGTGAATGCATGGGCTTTGGGGAGAGATTCTAAAGGATTTTCAAATAGCAATGTGGACATAAAAGGATTTGACTTTAGACTCATACCATTTGGTTCAGGTCGTAGAGGGTGCCCTAGGATTCATTTGGGTCTCACCACTGCTAAGATTGTTCTGGCTCAATTGGTTCATTGCTTCAATTGGGAGCTTCCTTTGGGCATGTCCCCTGATGAATTGGACATGACTGAGAAATTTGGTCTTACAATGCCAAGAAGTAAGCATTTGCTAGCTGCGCCAACTTATCGCCTAGCAGATGAAATTGGAAAGCAATAA 438 0.4201 MVSPKSPPKTLRLYPVAPLLVPRECREDVTIDGYYIKKKSRVIVNAWALGRDSKGFSNSNVDIKGFDFRLIPFGSGRRGCPRIHLGLTTAKIVLAQLVHCFNWELPLGMSPDELDMTEKFGLTMPRSKHLLAAPTYRLADEIGKQ 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02515 145 Gene3D Cytochrome P450 9 137 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02515 145 Pfam Cytochrome P450 10 128 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02515 145 SUPERFAMILY Cytochrome P450 10 136 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02515 145 PANTHER CYTOCHROME P450 93A3-LIKE 9 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02515 Vimu-Chr1 36492280 36492753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02515 9 138 Monolignol Biosynthesis Gene Families AT4G36220 47.183 3.09e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02515 - - gmx:100798918 231.876