Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02481 ATGGAAGGTTCTAGAATGGAGAATTTAGTCAGAGCTGAGAAATCCCTCAGACTCAGCTTAGAGAAATCGAAGTCGGTGGGGTTGGCTTTGGAGAGAGCGGGACCGAGGTTGGCCGAAATCAGGCAGCGGCTACCGTCGTTGGGATCGGCGGTGCGGCCGATTCGCGCTGAGAGAGATGCTCTGGTGGCCGTCGGCGGCCATATCAACCGCGCTGTGGGCCCCGCTGCGGCGGTGCTCAAGGTTTTTGACGCCGTCCATGGACTCGAGAAGTCGCTGCTGTCGGATCCCCGGAGCGACATAGCCGGGTACTTGTCAGTGCTGAAACGTCTCCAGGAGGCGTTGAGGTTCTTGGGGGACAATTGTGGGTTGGCTATACAGTGGTTGGAAGACATAGTTGAGTATTTGGAAGACAATTCCGTTGCTGATCAGGTTTATCTGGCGAATTTGAAGAAGGAATTGAAGAATCTTCGCGAATCGCAGCATGGGGAACTCGATGGTGGGTTGTTGGATGCTGCATTGCGCAAGTTGGAGGATGAGTTCAGGCTGCTGTTGACTGAGAATAGCGTACCACTGCCGATGTCGGCGACTGCGGCGGGTGATGGTATGGCATGCATTGCGCCGTCGCCGCTGCCTGTATCGGTTGTGCAGAAGCTGCAGGCGATTCTGGGGCGGTTGATTGCCAATGACAGGCTGGATAGGTGTGTGGGGATTTATGTTGAGGTGAGGAGTTCGAATGTTAGGGCAAGTTTGCAGGCACTGAATTTGGATTACCTTGAGATTTCTGTGTCGGAGTTCAATGATGTACAGAGCATTGAGGGGTATATAGCTCAGTGGGGGAAGCATTTGGAGTTTGCTGTGAAGCATTTGTTTGAGGCTGAGTATAAGCTTTGCAATGATGTGTTTGAGAGGATTGGATTGGATGTGTGGATGGGTTGCTTTTCGAAGATAGCTGCGCAAGCGGGTATACTGGCGTTTCTTCAGTTTGGGAAGACAGTTACTGAGAGTAAGAAGGACCCCATTAAGCTTTTGAAGTTGCTGGATATTTTCGCGTCGTTGAGCAAGTTGAGATTGGATTTCAACAGGCTTTTTGGCGGTGGGCCATGTGTTGAGATACAGAATTTGACTAGAGATCTTATTAAGAGGGTGATTGATGGGGCTGCAGAGATTTTCTGGGAGCTTTTTGTTCAGGTGGAGTTGCAGAGGCCGAATCCACCACCAGTGGATGGCAATGTGCCGAGATTGGTGAGCTTTATCACTGATTACTGTAACAAGCTCCTTGGGGACGACTATAAGCCGATACTGACTCAGGTTCTGATAATTCACAGAAGTTGGAAGCGCCAAAGCTTTCAAGAGAAACTCCTTGTTACTGAGATTTTGAACATTGTGAAGGCTGTGGAGCAGAATGTAGAGACTTGGATCAAGGCTTATGATGATCCTATACTGTCCCACTTTTTTGCTATGAACAATCACTGGCATCTGTGCAAGCATTTGAAAGGGACAAAGCTTGGGGAACTCTTGGGGGATTCCTGGCTGAGGGAGCACGAACAGTATAAGGAGTATTACTCTACAATCTTTTTGAGGGACAGTTGGGGAAAGCTTCCTGGACATTTGAGTAGGGAAGGGTTGATTCTTTTCTCTGGAGGGCGCGCCACTGCTCGTGACCTGGTCAAGAAAAGGTTGAAGAAGTTCAATGAAGTTTTTGATGAGATGTATACTAAGCAGTCAAGTTGGATAATGCCAGAACGGGATCTGAGGGAGAAAACATGTCAGCTTATAGTGCAAGCTGTGGTGCCTGTATACCGCAGTTACATGCAGAATTATGGTCCTTTAGTGGAGCAAGATGCTAGCTCCACAAAATATGCAAAGTACACCGTTCAGAAGCTTGAGGAAATGCTCTTGTGTCTTTATCGGCCAAGGCCTGTAAGACATGGCAGCTTGAGAAGTCCAACATTTAGTGCAAAATATGGCAATGGAGTACCTGATCTTCGCAGAACAGCATCTGCAGTTGTGTAA 2013 0.4868 MEGSRMENLVRAEKSLRLSLEKSKSVGLALERAGPRLAEIRQRLPSLGSAVRPIRAERDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRSDIAGYLSVLKRLQEALRFLGDNCGLAIQWLEDIVEYLEDNSVADQVYLANLKKELKNLRESQHGELDGGLLDAALRKLEDEFRLLLTENSVPLPMSATAAGDGMACIAPSPLPVSVVQKLQAILGRLIANDRLDRCVGIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLSKLRLDFNRLFGGGPCVEIQNLTRDLIKRVIDGAAEIFWELFVQVELQRPNPPPVDGNVPRLVSFITDYCNKLLGDDYKPILTQVLIIHRSWKRQSFQEKLLVTEILNIVKAVEQNVETWIKAYDDPILSHFFAMNNHWHLCKHLKGTKLGELLGDSWLREHEQYKEYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYTKQSSWIMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDASSTKYAKYTVQKLEEMLLCLYRPRPVRHGSLRSPTFSAKYGNGVPDLRRTASAVV 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02481 670 SUPERFAMILY Cullin repeat-like 78 636 IPR016159 -
Vimu1g02481 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 71 632 IPR004140 GO:0000145|GO:0006887
Vimu1g02481 670 Gene3D Exocyst complex component Exo70 124 643 - -
Vimu1g02481 670 FunFam Exocyst subunit Exo70 family protein 128 642 - -
Vimu1g02481 670 Pfam Exo70 exocyst complex subunit 277 632 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02481 Vimu-Chr1 36000309 36006259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02481 6 670 EXO70 exocyst subunit family AT4G31540 72.378 0.0 1024
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02481 K07195 - gmx:100796139 1238.79