Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02361 ATGCAGCTATATCATCATCCGTTGGATTTGGACAGCCAGAGGGTGAGAATTTCATTGGAGGAGGAGGGTGTGGATTATACATCTCACCATGTCAATCCCATTACTGGCAAGAACTTGGATTCTTCTTTCTTCAAGATGAATCGCCGTGGAAGGGTCCCTGTTTTCCAAAATGGTTCTCACATCATTTACAATACTATTGATATAATCCAGTACATAGAAAGAATTGCTGTGGTTTCCTCAGGGGCTGAGAGTATCAGTACCAGTAACAGGGAAGTGATTGAATGGATGCAGAGGATACAAGACTGGGATCCCAAGTTTTTCACACTTGCACATATACCAGAGAAATATCGTGTTTATGTTTCCAAGTTCATAAGGCAAGTGGTGATTGCTCGCATGTCCGAGTCACCTGAATTAGCAGGAGATTACCATAGGAAATTGAGAGAAGCCTATGAAACTGAAGAGAAATTGAAAGAAGCAGATGTTTTGAGAAGGGGCAAAGAGCATTTGGTTAGATTGCTTGATGAGGTGGAGAGGCAACTGTGTGAAACACCTTTTTTGGCAGGTCAAGATTTTACCATGGCTGATGTGATGCTCATTCCAGTATTAGCTCGTTTAAAACTCTTGGATTTAGAGAATGAGTACATAACTAGAAGGCCAAACATTGCTGAGTACTGGCTTTTGGTTCAGCAAAGACCTAGTTATAAAAGGGTGATTGGTAAGTACTTTAATGGTTGGAGAAAGCACAAAACACTCTTGAAAACATGGTTCTTAGTTCGTCTTCGAAGTTTGCTGAAAAAATACTAG 804 0.4067 MQLYHHPLDLDSQRVRISLEEEGVDYTSHHVNPITGKNLDSSFFKMNRRGRVPVFQNGSHIIYNTIDIIQYIERIAVVSSGAESISTSNREVIEWMQRIQDWDPKFFTLAHIPEKYRVYVSKFIRQVVIARMSESPELAGDYHRKLREAYETEEKLKEADVLRRGKEHLVRLLDEVERQLCETPFLAGQDFTMADVMLIPVLARLKLLDLENEYITRRPNIAEYWLLVQQRPSYKRVIGKYFNGWRKHKTLLKTWFLVRLRSLLKKY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02361 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Vimu1g02361 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Vimu1g02361 267 CDD GST_N_family 1 73 - -
Vimu1g02361 267 Gene3D Glutaredoxin 1 75 - -
Vimu1g02361 267 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Vimu1g02361 267 Gene3D - 125 238 - -
Vimu1g02361 267 SUPERFAMILY GST C-terminal domain-like 156 241 IPR036282 -
Vimu1g02361 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 251 IPR010987 -
Vimu1g02361 267 SFLD Main (cytGST) 1 231 - -
Vimu1g02361 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Vimu1g02361 267 Pfam Glutathione S-transferase, C-terminal domain 161 224 - -
Vimu1g02361 267 SFLD Glutathione Transferase (cytosolic) 1 231 IPR040079 -
Vimu1g02361 267 CDD GST_C_family 147 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02361 Vimu-Chr1 34143235 34144411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02361 1 267 Glutathione S-transferase Gene Family AT1G77290 68.914 9.79e-141 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02361 K22077 - gmx:100808461 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02361 1 34143235 34144411 Vimu1g02361 1 34143235 34144411 ECH
Vimu1g02361 1 34143235 34144411 Vimu10g02320 10 33862350 33865374 PCT