LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu1g02329	ATGGGAAGTGTGTTGCTCCTCCAACGTGATTCTGTATTGATGAAGCTATCGCTAATACTTATTCTTATCAGAAGTGGCAGCGCTCACAACGAGTGCCATGAGGAAAATTTGTCTTGTGGGCCGGACCAACCCCTTATCAGATTTCCCTTCCAACTCGTGAGGGAGATGAAGGAGCCATGCAGTTATCCCCGTCTTTGTCTTTCTTGTACTGAAAATAATCAGACCATGCTTCTGCTTCCAACGGTCAAACTCCAAGTCAAAAATATATTCTACGAAGATCAGGAAATAGTCTTAACTGACCCGGAAAACTGCTTGTTCAACAAGTATATGCAAATAACCAATTTTGTTCAGAGTTACCAATTTGAATTATACGATAGAAACTTGAGCTTCTTCAATTGTACTTCAGCTGGGCATCGACACCTGCGCTACCCCTACAGGGAAGACTCGTATTCCCAAGATTTGGACTCCTGTCCGATTTTCATTTCTGATTCTTTTGTAAGTGTCCTCGAATTAGATCTAACATCCTGTACCAAGATGTTCGACATCCCTTTGCCAATCGATTTGAGCGACGGGTATCCCTTGTATTTGAGATGGTTCAAACCAAATTGTTCTGAGTGCGAAGCTAAAGGCAAGAGATGTAAATGGAAGACCAACAACGACACAGAAGGAGACATCGAATGTTTTGAATGCACACGAAAAAGAATTCACGTTCCTAAATCTCTTATTTTTGCTACTACAGGTCATATCAGAGACTCTTACACTTTCTCTTTCTAA	774	0.4134	MGSVLLLQRDSVLMKLSLILILIRSGSAHNECHEENLSCGPDQPLIRFPFQLVREMKEPCSYPRLCLSCTENNQTMLLLPTVKLQVKNIFYEDQEIVLTDPENCLFNKYMQITNFVQSYQFELYDRNLSFFNCTSAGHRHLRYPYREDSYSQDLDSCPIFISDSFVSVLELDLTSCTKMFDIPLPIDLSDGYPLYLRWFKPNCSECEAKGKRCKWKTNNDTEGDIECFECTRKRIHVPKSLIFATTGHIRDSYTFSF	257

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu1g02329	257	PANTHER	RING/U-BOX SUPERFAMILY PROTEIN	14	240	IPR046948	-
	Vimu1g02329	257	Pfam	Wall-associated receptor kinase galacturonan-binding	32	100	IPR025287	GO:0030247

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu1g02329	Vimu-Chr1	33829743	33830516	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu1g02329	38	228	C3H Transcription Factor Family	AT2G46495	30.732	3.45e-17	78.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu1g02329	-		-	var:108320263	400.979