Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02290 ATGGCCGAACTAGTGTTCTACTCTTTAACTCTTTTCTTCCTTATCTTCTTAACCTTTATAGTGAGAAAAATAGGAAACAAAAACAAGAAAGCTGAGGAAACACCTTATAACATGCCCCATGGACCTAGAAAGCTACCTATTATAGGAAATATGCACAATCTGTTATGTTCTTTGCCCCATAGAAAATTAAGAGATCTGGCTTTAAAATATGGATCCTTGATGCATCTTCAACTTGGAGAGGTTTCTACCATTGTCATTTCATCCCCTGAGTGTGCTAAGGAAGTGATGAAAGCCCATGATATTAACTTTGCCACAAGGCCCAAAGTCCTAGCTATTGATGTAATCAATTACAACTGCACAAACATTGCTTTTGCTCCTTATGGAGATTATTGGAGGGAACTAAGAAAAATTTGCGCATTAGAGCTTTTAAGCCTAAAACGTGTCAACTCATACCAGCCAATCAGAGAAGAAGAGTTCTTCAATCTTGTCAAATGGATAGATGCGCAGAAAGGATACCCCATTAACCTCACTAAAGTTGTACTTTCATCAATTTATGCAATTGCTTCAAGGGCTGCCTTTGGCAAGAAATTCAAAGACCATGAAAAATTTATATCATTGCTGGAGGTTTACATTGGAGATTTCTTTCCTTCTGCTGTTTGGTTGCAACATGTCACTGGCATGAGGCATAAGCTCGAGAGGGTGCATCAAGAAGCTGATCAGATAATGGAAAACATCATCAATGAGCATAAGGAGACAAGTCTAAGGCCAAAGGTGACCAGAGGGAAGCAGCAGATCTTCTGGATGTTCTCATACATTATGAAGATGGACATTTTTGGTGGCGGTGGCGAAACATCATCAACAACCATAGATTGGGCGATGGCTGAAATGATGAAGGATTCAAGAATAATGAAAAAAGCACAAGCTGAGGTTAGAGAGGTATTCAACATGAAAGGAAGGGTTGATGAAAATTTCCTCGATGAACTCAAATATTTGAAAGTAGTTGTGAAAGAGACCTTGAGATTACACCCTCCAACTCCTCTTTTGCTTCCAAGAGAATGTGGTCAAACATGTGAGATACATGGCTATCACATACCTGCCAAAAGCAAAGTCATAGTCAATGCTTGGGCAATTGGAAGAGATTCAAACTATTGGAGCGAACCAGAGAGGTTTTATCCCGAGAGATTCATTGATAGCAGTATTGACTACAAGGGGAGTAATTTTGAATACATTCCTTTTGGAGGTGGAAGAAGGATATGCCCAGGCAACACATTTGCTATTAGAAATCTTGAACTTGCCCTTGCAATGTTGTTGTATCACTTTGATTGGAAACTTCCCAGTGGAATCACAAGTGAAGAATTGAACATGAGTGAGGTGTTTGGGCTCACAATGAGAAGAAAAGATGAATTGTACCTGGTCCCTTTTCCTTATCATCCTTTGCCTGTCATTTGA 1449 0.3948 MAELVFYSLTLFFLIFLTFIVRKIGNKNKKAEETPYNMPHGPRKLPIIGNMHNLLCSLPHRKLRDLALKYGSLMHLQLGEVSTIVISSPECAKEVMKAHDINFATRPKVLAIDVINYNCTNIAFAPYGDYWRELRKICALELLSLKRVNSYQPIREEEFFNLVKWIDAQKGYPINLTKVVLSSIYAIASRAAFGKKFKDHEKFISLLEVYIGDFFPSAVWLQHVTGMRHKLERVHQEADQIMENIINEHKETSLRPKVTRGKQQIFWMFSYIMKMDIFGGGGETSSTTIDWAMAEMMKDSRIMKKAQAEVREVFNMKGRVDENFLDELKYLKVVVKETLRLHPPTPLLLPRECGQTCEIHGYHIPAKSKVIVNAWAIGRDSNYWSEPERFYPERFIDSSIDYKGSNFEYIPFGGGRRICPGNTFAIRNLELALAMLLYHFDWKLPSGITSEELNMSEVFGLTMRRKDELYLVPFPYHPLPVI 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02290 482 Pfam Cytochrome P450 39 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02290 482 Pfam Cytochrome P450 275 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02290 482 Gene3D Cytochrome P450 31 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02290 482 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02290 482 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02290 482 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02290 482 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02290 482 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02290 482 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02290 482 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02290 482 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02290 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Vimu1g02290 482 PANTHER CYTOCHROME P450 71B11-RELATED 17 474 - -
Vimu1g02290 482 FunFam Cytochrome P450 99A2 28 474 - -
Vimu1g02290 482 SUPERFAMILY Cytochrome P450 39 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02290 482 Coils Coil 228 248 - -
Vimu1g02290 482 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02290 482 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02290 482 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02290 482 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu1g02290 482 CDD CYP71-like 69 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02290 Vimu-Chr1 33317011 33319069 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02290 8 477 Cytochrome P450 AT1G13110 39.286 1.50e-121 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02290 - - gmx:100778572 717.613