Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02228 ATGGAAGAGTTATGTGGAGCCAAGGTTGGGAACATGGTTAATAAGGCCAAGCCATATGTGTTAACTGTGGGGTTGCAATTTGGGATGGCAGGGACATACCTCTTCACCATGGCAAGTCTCAACCATGGAATGAGTCGTTTCGTGTTCATTGTGTATCGCAATGCCATTGCTGCATTGGCCCTTGCTCCCTTTGCCTTGATATTCGAAAGGAAAGTTAGGCCAAAGATGACATGGACTGTGTTCCTGCAGATACTAGTACTTGGATTTCTTGAGCCAGTGGTTGACCAAGGTTTTACTTTCTTGGGGATGCAATACACTTCTGCTTCCTTTGCATCTGCTGTTATGAATGCCGTACCCTCTGTAACCTTTGTGCTTGCACTATTTCTCAGGTTAGAGCGGGTAAACATGAGGGAACTACGTAGCCAGGCGAAAGTGGTGGGAACCTTGGTGACATTTGCTGGGGCTTTGTTAATGACACTATACAAAGGTCCTCAATTTGACCTATTTCATCACTCAAACACAACTCACCAACAAAGTGGAAGCAACTCCACTCAGAATAATCACTCTCACTGGTCCATAACGGTGAAAAGGTACCCTGCGGAACTGTCACTGTCATCGTTGATATGTTTGGGAGGTGCATTGCAAAGTGCTGTGGTTGCTGTGATTGCAGATCACAACCCTCGTGCATGGGCTATCGGTTTCGACTACACCCTCTATGGCCCTCTATACACTGGAATAATTAGTTTTTTTTTCTTTTATAATTTATTACAGGGAATAATGAGTTCAGGAATAGCATATTATATACAGGGGTTGGTAATGCAAAGCAGAGGTCCAGTATTTGTGACATCCTTTAATCCTCTTTGCATGATCATTGTTACTGCTTTGGGCTCCCTTCTTCTTGGAGAACACCTCTACCTCGGAAGTATCATTGGAGGCATGATTATCGCAGTGGGTCTTTACTCTGTGGTGTGGGGTAAAGGCAAAGATTATGGAGATGAGGCTTCATCATCACCAGCAAGAACAAAAGAAACAGAAAGAATGCAGCTCCCAGTTACCTCACCAAATAACAAATGA 1074 0.4404 MEELCGAKVGNMVNKAKPYVLTVGLQFGMAGTYLFTMASLNHGMSRFVFIVYRNAIAALALAPFALIFERKVRPKMTWTVFLQILVLGFLEPVVDQGFTFLGMQYTSASFASAVMNAVPSVTFVLALFLRLERVNMRELRSQAKVVGTLVTFAGALLMTLYKGPQFDLFHHSNTTHQQSGSNSTQNNHSHWSITVKRYPAELSLSSLICLGGALQSAVVAVIADHNPRAWAIGFDYTLYGPLYTGIISFFFFYNLLQGIMSSGIAYYIQGLVMQSRGPVFVTSFNPLCMIIVTALGSLLLGEHLYLGSIIGGMIIAVGLYSVVWGKGKDYGDEASSSPARTKETERMQLPVTSPNNK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02228 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 163 - -
Vimu1g02228 357 MobiDBLite consensus disorder prediction 330 357 - -
Vimu1g02228 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 327 - -
Vimu1g02228 357 MobiDBLite consensus disorder prediction 341 357 - -
Vimu1g02228 357 Pfam EamA-like transporter family 30 159 IPR000620 GO:0016020
Vimu1g02228 357 PANTHER WAT1-RELATED PROTEIN 17 330 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02228 Vimu-Chr1 32102495 32105387 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02228 10 357 Nodulin-like Gene Family AT4G08300 42.703 1.47e-106 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02228 - - gmx:100777641 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02228 1 32102495 32105387 Vimu1g02228 1 32102495 32105387 ECH