Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02225 ATGGCTGGAACATTCATCATTACCAAGGCTTGTATGGATCATGGAATGAGTCGCTTTGTGTTAACTGTGTATCGCAATGCCATTGCTGCGTCTGTTGTTGCTCCTTTTGCGATTATCTTTGAAAGGATAGTGATTGACCAAGGCTTCACTTATTTGGGGATGCAATACACTTCTGCTACTTTTGCATCTGCTATTATGAACGCTGTACCTTCTGTAACCTTTGTCATAGCAGTAATTTTCAGGTTAGAGAGTGTAAAGTTGAAGGAGCTACGTAGTCAAGCGAAAGTAATTGGAACCTTGGTAACCTTTGGTGGGGCTCTGTTGATGACACTTTACAAAGGTCCGAAAATCAATCTTATAAATAATCCAAACAGCTCCCAGAAAGATGCAAACGAGACCCTTGAGGATGACAAACACTGGTTAACAGGGACTCTATTTTTATGTATTGGTTGTTTGGCTTGGTCTTCCTTTTACATTTTGCAGTCCATAACAGTGAAAAGGTATCCTGCGGAACTATCGCTGTCGTCGTTGATATGCTTGGCCGGTGCATTGCAAAGTGCCGTGGTTGCTCTGATTGCAGATCACAACCCTCGTTCTTGGGCTATTGGTTTCGACTTCACACTCTATGGCCCTCTTTATGCTGGAATAATGAGTTCAGGAATAGCATATTATGTTCAAGGGCTGGTAATGAAAAGCAGAGGACCTGTGTTCATGACAGCCTTCAATCCTCTATTAATGATCAACGTTGCTACTTTTGGCTCCTTTCTTCTTGGAGAACAGATCTACGTTGGAAGTATCATTGGTGCCACAATTATCGTAGTGGGGCTTTACTCAGTGGTGTGGGGTAAAGCCAAAGACTATCCACTCCTCGAACAGCCATCAGCAACAGCAACAAAGGACACAGAAGCACCAGACTCCCAATAA 924 0.4307 MAGTFIITKACMDHGMSRFVLTVYRNAIAASVVAPFAIIFERIVIDQGFTYLGMQYTSATFASAIMNAVPSVTFVIAVIFRLESVKLKELRSQAKVIGTLVTFGGALLMTLYKGPKINLINNPNSSQKDANETLEDDKHWLTGTLFLCIGCLAWSSFYILQSITVKRYPAELSLSSLICLAGALQSAVVALIADHNPRSWAIGFDFTLYGPLYAGIMSSGIAYYVQGLVMKSRGPVFMTAFNPLLMINVATFGSFLLGEQIYVGSIIGATIIVVGLYSVVWGKAKDYPLLEQPSATATKDTEAPDSQ 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02225 307 SUPERFAMILY Multidrug resistance efflux transporter EmrE 26 114 - -
Vimu1g02225 307 PANTHER WAT1-RELATED PROTEIN 1 287 IPR030184 GO:0016020|GO:0022857
Vimu1g02225 307 SUPERFAMILY Multidrug resistance efflux transporter EmrE 200 284 - -
Vimu1g02225 307 Pfam EamA-like transporter family 142 280 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02225 Vimu-Chr1 32037583 32042595 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02225 2 304 Nodulin-like Gene Family AT1G44800 44.479 9.08e-96 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02225 - - gmx:100812238 454.136