Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02221 ATGATGCCTAATGATATTATATTATTCTTGCAATGTGGTAACCAGGTTAGAGACAGTGAATTTGAGAAAAATACACAGCGTGGCCAAGGTAATTGGAACCGCAGTAACAGTGACAGGAGCCATGGTTATGACTTTGTACAAAGGGGTCAAGCAGCCCACCATGAAAGTGGCAGCACCACACAACCATCTGAACAAAACTGGGTGCTTGGCACATCTTTCACTTTGAAGATGTACCCAGCAGAGCTCTCAGTGACAGCATGGATTTGCTTTTTGGGCATTTTTGAGGGTTCAATTGCAAGCCTTATATTTGAACGTGACATGAGTGTGTGGTCCATAGGCATGGATTCAAGGCTTCTTGCTTGTGTTTATTCTGGTGTGGTGTGTTCTGGAATGGCATACTATGTACAAGGAGTTGTAACCAGGGAACGTGGACCTGTGTTTGTGACTTCTTTCAGTCCATTGTGTATGATTATCACTGCTGCATTGGGATCCATTGTCTTGGCTGAGCAAGTTTACATGGGAAGTGTGATTGGAGCTATTATCATTGTGACTGGACTTTATACAGTGGTGTGGGGAAAAAGCAAAGACAGTGTGAAAAAAACCGAGGCAGAGAAAACTGAAGGCCAAGAATTGCCAATTAAGGACAGTGCAGCATCAGAATTAGGCAATTTTGACAGCATTGAGATCAATGTTCCTTCTGGGCAAGGAAGGAATGTTCTTGCATCACCAAGAACATAA 738 0.4309 MMPNDIILFLQCGNQVRDSEFEKNTQRGQGNWNRSNSDRSHGYDFVQRGQAAHHESGSTTQPSEQNWVLGTSFTLKMYPAELSVTAWICFLGIFEGSIASLIFERDMSVWSIGMDSRLLACVYSGVVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQVYMGSVIGAIIIVTGLYTVVWGKSKDSVKKTEAEKTEGQELPIKDSAASELGNFDSIEINVPSGQGRNVLASPRT 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02221 245 MobiDBLite consensus disorder prediction 20 39 - -
Vimu1g02221 245 PANTHER WAT1-RELATED PROTEIN 67 202 IPR030184 GO:0016020|GO:0022857
Vimu1g02221 245 Pfam EamA-like transporter family 82 190 IPR000620 GO:0016020
Vimu1g02221 245 MobiDBLite consensus disorder prediction 25 39 - -
Vimu1g02221 245 SUPERFAMILY Multidrug resistance efflux transporter EmrE 107 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02221 Vimu-Chr1 31897720 31898901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02221 56 230 Nodulin-like Gene Family AT4G08300 55.729 9.08e-67 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02221 - - gmx:100814921 326.635