Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g02132 ATGGATTATGGCTTTTGCAGGCACTTGATGGGTGATGCTTTAAGCACACTGACTGTGAATGAACTTAAGCAATTGAACAATAGACTTGAAAGAGGAATCACTAGAATCAGATCTAAGAAACTCCTACCTACACGGGTCGAATCACTGCTTGACCGAAACAAAGGCGGAGGAAACCGATCTCAATTCGTGAAAAATGAAGGAAAAAGCAAAGAAAATCGGTCAAAAGATGCAGGTGAGAGGCTGAGAGGTAAAGGAAAGTGCTTACCGCTTGAACTGTGGCGAATGAGAACTGTGACGAGAGCCTTCGATGATGGAGACGAGAGAAACGTTCTCGTGAGGGTATGCAATGGAGAATTGTGGTTGAATGAACGACAAATGATAGAGAGTAAAGAAGAGAAGAAAAGAGGAAGAAAGTGA 417 0.4269 MDYGFCRHLMGDALSTLTVNELKQLNNRLERGITRIRSKKLLPTRVESLLDRNKGGGNRSQFVKNEGKSKENRSKDAGERLRGKGKCLPLELWRMRTVTRAFDDGDERNVLVRVCNGELWLNERQMIESKEEKKRGRK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g02132 138 MobiDBLite consensus disorder prediction 64 82 - -
Vimu1g02132 138 Pfam K-box region 7 40 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vimu1g02132 138 MobiDBLite consensus disorder prediction 47 82 - -
Vimu1g02132 138 Coils Coil 19 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g02132 Vimu-Chr1 30521491 30522825 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g02132 7 47 MADS-box Gene Family AT4G09960 62.791 1.34e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g02132 K09264 - egr:104449826 64.3142