Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01974 ATGGGAGAAGATTGTGGAGCCTGGATTCCGGAGCTGCTTTTTGATTGGCAATCTCCCAATTTGAGCTCCTTCAATGCTGCACCCTTTGGCACGGGGAAGCAAAATGGTACAGCTGCAGCTATGAATCCAGTTGGCAACTCTGTTGCAAGAGATGCTACTACAATGCCAGCTTATGTGTCCTCTGGGCTGCCTCATACGCAGCCAGGACATTCTGGTGAACCTCATGGTTGGTTTTATTGTTTGCCTCGTTTCCGGCAGGGATTTACTACACCTGCTCGAAACTTCACAGCAGAGGAAAAGCTCCCTGCTAGCCATGCAAAAGGTTTTGGGGAGGAAATTGCTCCAGTTGGGGGTTTCCCTCAGAAGCAATTCATGGTTATTGATCAAACTGTTGATCAAACAACTCTGGTTTACAGTTCAAGATTTGGTCGGCCTGTTGAGTGCCTGACTTTGTGGGATTCAAAGCCGCATGGTTCTACAAATTTGAACAAGGGGAATGAATTGCTCTCATTGAGGAGAGATGTGAATCACGTGGCTGGACTTGGACCAACTTTGGATGATAAAGTTGATGAAAATCAGGGAACTGATGATGACATTGAAAGTGAGATGCATGAGGACACAGAGGAAATCAATGCATTGCTTTACTCTGACAGTGATGGTTATTCCACTGAGGATGATGATGATGATAATGATGAAGTTACTAGCACAGGACATTCACCCAGTACAACGACCACTCACCATAATCAGGAAGGACCTGGTAGATTAATGGCTGAGGAAATTGCTAGCTCTGTTGGAGAAACAAAGAAGAGAAAGCTGCAGGACGGGGCTTATGATGGTGACATGCAGTTCATGGACACTGCGAGTTCTCTGGATGGGAAAATACCCTTTGAAGTTGAAGATGATGCAGAATCAAGATGCTCCAGTGTTGGCAACAATAGTAGAGGGTCAGGTGGAATGAGTTCTTGGTCTGGCAATAAAAAGATGAGAAAGGAGAAGATTCAAGATGTTCTGAGCATTCTGCAGTGCATAATTCCTGGTGGAAAGGGCAAGGACCCAGTTGAACTTCTTGATGAAGCCATACGATGCTTGAAATCATTGAAACTCAAGGCTATAAAGCTTGGACTTGATCCCATATAA 1137 0.4494 MGEDCGAWIPELLFDWQSPNLSSFNAAPFGTGKQNGTAAAMNPVGNSVARDATTMPAYVSSGLPHTQPGHSGEPHGWFYCLPRFRQGFTTPARNFTAEEKLPASHAKGFGEEIAPVGGFPQKQFMVIDQTVDQTTLVYSSRFGRPVECLTLWDSKPHGSTNLNKGNELLSLRRDVNHVAGLGPTLDDKVDENQGTDDDIESEMHEDTEEINALLYSDSDGYSTEDDDDDNDEVTSTGHSPSTTTTHHNQEGPGRLMAEEIASSVGETKKRKLQDGAYDGDMQFMDTASSLDGKIPFEVEDDAESRCSSVGNNSRGSGGMSSWSGNKKMRKEKIQDVLSILQCIIPGGKGKDPVELLDEAIRCLKSLKLKAIKLGLDPI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01974 378 PANTHER TRANSCRIPTION FACTOR BHLH145 9 376 IPR037546 -
Vimu1g01974 378 MobiDBLite consensus disorder prediction 303 325 - -
Vimu1g01974 378 MobiDBLite consensus disorder prediction 235 250 - -
Vimu1g01974 378 MobiDBLite consensus disorder prediction 191 205 - -
Vimu1g01974 378 MobiDBLite consensus disorder prediction 305 323 - -
Vimu1g01974 378 MobiDBLite consensus disorder prediction 180 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01974 Vimu-Chr1 26334628 26335764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01974 76 370 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 31.104 2.46e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01974 - - gmx:100812109 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01974 1 26334628 26335764 Vimu1g01974 1 26334628 26335764 ECH
Vimu1g01974 1 26334628 26335764 Vimu10g02623 10 37621754 37623532 PCT