Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01956 ATGGTAAGCGATGGCATGAGGAAACCAAGACTATTGTGCCTTCATGGGTTTCGAACAAGCGGAGAAATACTGAAGACGCAGTTACATAAGTGGCCACAATCCGTTCTCGACAACCTTGATCTTGTTTTTGTGGATGCTCCTTTTCCTTGCCAAGGCAAATCCGACGTCGAAGGCATTTTTGATCCTCCTTACTACGAGTGGTTCCAGTTCAACAAGGAATTTACAGAGTACACCAACTTTGACGAGTGCCTTAAGTACATTGAGGACTGCATGATCAAGCACGGACCTATTGATGGGCTTCTGGGTTTCTCACAGGATTTGAATATGACTCGGTGTTTGATTTTGACCAAACAGGGAGCAATATTATCAGCTGCGCTGCCAGGTCTTCAGGAGAAGGGTGTGGCACTGACGAAGGTTCCCAAGGTGAAATTCGTTGTTATTGTAGGAGGGGCAAAGTTTAGGTCACCGTCTGTGGTGGACAAAGCATATTCTTCTCCCATTAGCTGTCCCTCTCTTCATTTTCTAGGTGAAATGGATTTTTTGAAACAATATGGGATGGAACTACTAGAATCCTGTGTTGAACCCGTGGTAATTCACCACCCCAAAGGACACACAATACCAAGATTAGATGATAAGAGCGTGAAGACCGTGATGGATTTCATCGAAAGGATTAAGAAAGACGTCTCAAAATAA 693 0.4416 MVSDGMRKPRLLCLHGFRTSGEILKTQLHKWPQSVLDNLDLVFVDAPFPCQGKSDVEGIFDPPYYEWFQFNKEFTEYTNFDECLKYIEDCMIKHGPIDGLLGFSQDLNMTRCLILTKQGAILSAALPGLQEKGVALTKVPKVKFVVIVGGAKFRSPSVVDKAYSSPISCPSLHFLGEMDFLKQYGMELLESCVEPVVIHHPKGHTIPRLDDKSVKTVMDFIERIKKDVSK 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01956 230 SUPERFAMILY alpha/beta-Hydrolases 7 221 IPR029058 -
Vimu1g01956 230 Gene3D alpha/beta hydrolase 5 228 IPR029058 -
Vimu1g01956 230 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 6 228 - -
Vimu1g01956 230 FunFam esterase AGAP003155 5 228 - -
Vimu1g01956 230 Pfam Serine hydrolase (FSH1) 7 212 IPR005645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01956 Vimu-Chr1 25898466 25900612 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01956 7 207 Sulfurtransferasese or Rhodanese AT1G09280 28.326 6.68e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01956 - - gmx:100500670 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01956 1 25898466 25900612 Vimu1g01956 1 25898466 25900612 ECH