LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu1g01883	ATGGATAAAATGAAAGCTAACTTTGCTAAAGAGTCAAATCAATTACCTGAACAACTTATGATTAGCCCGCAAAATGTAAGTGTTATTACTTTAAGAACAAGTAAGCAAATACAAGGTTTTAAAGAAGCCCAAGAGGATGAAGATAAGGACAACGAAGACACATACAGTGATAAAAGTGGAGGATCAAGTGAACCATCACAAGCTACACTTGAGACGGCCACCGATGACTCCAGCCTCCAGAGACCAGGGTCTCTCTCCCCCTTTTCCAACCGGACCTACACTCTCTACCACGCCCACCACGTCACCGGCGACGACAAACGTCACCGGAATCAAAGGAGGACAAAGGGGGTGACGCGCCTGGTGGAAGGGGGCGCGGCATCAATGGCTGCGGAGGTCATGGCGGTGATGCCGGAGGAGGGGGTGACAATTCTGGAGGCGGTGGTCAAGAGGGGTGGGTTGGTGGTTATGGCGGCGGCTTACGCCGGGATTAAGCGGTTGGGGGCGGTTCTCAAGGAGGGGGCGGCGACGCTGGTCACCATGTGTCGGAAGGGCGGGTCGGAGGTTGTGGCTGAGCTGGCGGCGGTTCCCAAAGTGGAGAGGATAATTTGGGAACTCATGGCCATGGCGACACTGTTGAGGATTTTGCGGCGGAGGGCGGCGGGGCTGGATGGCGGAATCAACTTTGAACGAATTGGCATAGGATTTATGATTTGA	714	0.535	MDKMKANFAKESNQLPEQLMISPQNVSVITLRTSKQIQGFKEAQEDEDKDNEDTYSDKSGGSSEPSQATLETATDDSSLQRPGSLSPFSNRTYTLYHAHHVTGDDKRHRNQRRTKGVTRLVEGGAASMAAEVMAVMPEEGVTILEAVVKRGGLVVMAAAYAGIKRLGAVLKEGAATLVTMCRKGGSEVVAELAAVPKVERIIWELMAMATLLRILRRRAAGLDGGINFERIGIGFMI	237

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu1g01883	237	MobiDBLite	consensus disorder prediction	1	23	-	-
	Vimu1g01883	237	MobiDBLite	consensus disorder prediction	38	91	-	-
	Vimu1g01883	237	MobiDBLite	consensus disorder prediction	58	91	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu1g01883	Vimu-Chr1	23522823	23526850	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu1g01883	115	221	U-box Gene Family	AT5G01830	48.387	3.56e-23	95.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu1g01883	-		-	gmx:100805405	150.984