Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01729 AGAATTTATGATCTTGGAGCTCGAAAGTTTGTGGTAAGTAGAATTGGTCAAATTGGTTGCACACCAGTATCTGTTGTAAGGACACCATATTCCCAAAAATGCAATGAAGATATAAATCAGAAGGTTAAACACTACTCAAACAAACTTCCTGGGAAGCTACAAGAGTTGCAAACTCAACTCTCACATTCACACTTTATTAATTTGGATAATTACAATTTCAATCAGCAAATAAGAAATTCTCCTGAAAACTTTGGGTTCAAATATATTTTTGACTCGTGTGTCCAAGGAAGGAAACCTTGTGCAAACCGGAATGAATATTATTTTTTTGACTTTGCTCACCCTACTGAAGCTACAAATAAAATATATGCAAATGAGTGTTTTAGTGGAACCCAATTGTGTCTTCCTTACAATATTCTGAAATTAATTCATGCAAATTAA 438 0.3333 RIYDLGARKFVVSRIGQIGCTPVSVVRTPYSQKCNEDINQKVKHYSNKLPGKLQELQTQLSHSHFINLDNYNFNQQIRNSPENFGFKYIFDSCVQGRKPCANRNEYYFFDFAHPTEATNKIYANECFSGTQLCLPYNILKLIHAN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01729 145 Gene3D SGNH hydrolase 1 131 IPR036514 -
Vimu1g01729 145 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 1 141 - -
Vimu1g01729 145 Pfam GDSL-like Lipase/Acylhydrolase 2 124 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01729 Vimu-Chr1 17917794 17918337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01729 2 116 Pollen Coat Proteome AT1G75910 28.099 3.83e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01729 - - vun:114171911 270.011