LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu1g01686	ATGACTCCATGCTCAATTCGTTTTGAAGAGTGTCTTCCTACTTCAGTGGTTATCGTGCTGGAGTACAATGACAAACTTTTAAAGAACTTTCTAGGCTGCAGGCTTTGGCACAGAGTATCAACTACAGACTACCCTGAACAACCCACCTTCATCGTCTTGAGGCCTGAGAAAAGATTCAAGTTAGAAAACCTGCACCCTTCAACTGAGTACTTTTGCAAGGCTTCTCTGTTCAGCAGCACAGGGATTTTGGGTGCTGCAGAGGCTAGATGGGTGACCCAGTGTGAGCCCACCAATTCTGCAAAAGGAATAAGTTGTGGAGGAAATCGTTTTAGAGTGGAAATTTGTGGTCAGGATCATATAACTGCTGAAACTCATCATCCCACAGAGTCTGCCAACTCGGACATGAAGTTATCATCTCGACAACATCCTGGGAAACCCATGAGTTTGAACATCAGAGGAAGGTTTGAAGAGTTCCTGTCGAAGCCTCAGTCATTAGAGCCTTTTGCATATAAAAATCTTGCTGCTGCAGTTTCACCTTCGACACCTTGTAAATCCTACGAGATGAGGCAAATTCCTGGTTTGAATGCTAGAAAGCGGTCGAAGGAAAATGACTACGAGTATTCTGTGAGGGTGGTGAAATGGTTGGAGCATTTAGGGCACATAGATGAAATCTTCAGAGTGAGATTTCTGACTTGGTTCAGCCTTAAGGCTACTCAACAGGAGAGAAGGGTGGTTAGTGCTTTTGTTGATGCATTGATCGACGACCCAGCAAGCTTAGCAGACCAGCTCATACACACTTTCAGCGATGAAATATGTTGCGAGCAAAAACCCTTGTGA	837	0.4456	MTPCSIRFEECLPTSVVIVLEYNDKLLKNFLGCRLWHRVSTTDYPEQPTFIVLRPEKRFKLENLHPSTEYFCKASLFSSTGILGAAEARWVTQCEPTNSAKGISCGGNRFRVEICGQDHITAETHHPTESANSDMKLSSRQHPGKPMSLNIRGRFEEFLSKPQSLEPFAYKNLAAAVSPSTPCKSYEMRQIPGLNARKRSKENDYEYSVRVVKWLEHLGHIDEIFRVRFLTWFSLKATQQERRVVSAFVDALIDDPASLADQLIHTFSDEICCEQKPL	278

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu1g01686	278	PANTHER	VIN3-LIKE PROTEIN 2-RELATED	2	137	IPR044514	GO:0010048\|GO:0040029
	Vimu1g01686	278	MobiDBLite	consensus disorder prediction	126	143	-	-
	Vimu1g01686	278	MobiDBLite	consensus disorder prediction	123	143	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu1g01686	Vimu-Chr1	17134596	17135950	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu1g01686	5	271	PHD Gene Family	AT5G57380	25.952	1.46e-19	86.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu1g01686	-		-	gmx:100785502	477.633