Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01685 TTTCTTCTTGACCCTGCAAAATGGGGTGTGCTGAGTTTGCCGGAAAAGCAAAGACTAGTCCATGAGATTGCACAACAGTCGAAAGATGCGTCTACTATGCTTCAGACATTTACACGCAGGGAACTTCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGCTATACCAAGAGTCAAATGATAGAACATCTTTTGAAGATAATTTCTAAGAACTCTAACTTGCACGACATGGAGAAAGCAATTATTGGTTGCCAAAGAAGCAAGAAGAATGGATATACTGTCTTTGCGAATATCCCTGGCTCACAGAATTCTTGTAGGAACAGAAATGTACAAGGAACTGCAAAAGATTGTAGAAACTGCTCTCAAATTACTGGAGAATGA 393 0.3969 FLLDPAKWGVLSLPEKQRLVHEIAQQSKDASTMLQTFTRRELLEIICAELGKERKYTGYTKSQMIEHLLKIISKNSNLHDMEKAIIGCQRSKKNGYTVFANIPGSQNSCRNRNVQGTAKDCRNCSQITGE 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01685 130 PANTHER VIN3-LIKE PROTEIN 2-RELATED 3 89 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01685 Vimu-Chr1 17133503 17134564 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01685 4 123 PHD Gene Family AT4G30200 42.029 1.94e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01685 - - gmx:100820128 146.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01685 1 17133503 17134564 Vimu1g01685 1 17133503 17134564 ECH