Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01684 ATGTGCACTACTGCTTCCTCGAAGGGTGAAAGGAAGAGAGAATCCTCAAAGGCAATGGAGAAGATTGTAAGTAGTGGTAAAGGAAGTACCGTAGTGGCTTGTTTTGGTTTCCGCGAACTCGCTACGACGACGAGGGGTTTTAAGGAAGTGAACTTAATTGGGGAAGGTGGTTTTGGAAGGGTTTACAAGGGTCGACTTTCAACGCGCGAGCTTGCTACCGTGAAACAATTGAGCCATGATGGTCAACAAGACAAAGAACCCCTAAGTTGGAGTTCTCGAATGAAGATTGTTGTTGGAGCTGCTCATGGCCTCGAGTATCTCCATTGTAAAGAAGATCCACCTGTTATTTACAAAGACTTGAAATCTGCTATCATCTTGTTAGATAATGAATTCAACCCAAAACTATCATATTTTTGGCTTGCTAAACTTGGACCTTTTGGATACAATACCCATGTTTCAACCAGAGTGATGGGAACATATGGCTATTGTGCGCGTAAGTATGCTATGAGCGGAAAATTAACTCTTAAATCTGATATCTACAACTTTTGTGTGGTTTTGTTGGAGTTGATCACTGGACGTAGAGCAATAGATGCCAGTAGAAATCCAGGAGAGAAAAATTCGGAGCAACCAAAATTTCATCCACTTATTGGTGATATTGTTGTTGCACTAGAGTGCATAAACATGGTACACGCCGCTCACCCCAACAACCATCTTCGGAAATGGACAGAAATTAATATTTCCAGGGTATAG 750 0.4187 MCTTASSKGERKRESSKAMEKIVSSGKGSTVVACFGFRELATTTRGFKEVNLIGEGGFGRVYKGRLSTRELATVKQLSHDGQQDKEPLSWSSRMKIVVGAAHGLEYLHCKEDPPVIYKDLKSAIILLDNEFNPKLSYFWLAKLGPFGYNTHVSTRVMGTYGYCARKYAMSGKLTLKSDIYNFCVVLLELITGRRAIDASRNPGEKNSEQPKFHPLIGDIVVALECINMVHAAHPNNHLRKWTEINISRV 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01684 249 ProSiteProfiles Protein kinase domain profile. 1 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu1g01684 249 SMART tyrkin_6 47 232 IPR020635 GO:0004713|GO:0006468
Vimu1g01684 249 Gene3D Transferase(Phosphotransferase) domain 1 83 245 - -
Vimu1g01684 249 SUPERFAMILY Protein kinase-like (PK-like) 35 199 IPR011009 -
Vimu1g01684 249 PANTHER OS07G0668900 PROTEIN 16 85 - -
Vimu1g01684 249 Pfam Protein kinase domain 94 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu1g01684 249 Gene3D Transferase(Phosphotransferase) domain 1 27 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01684 Vimu-Chr1 17107152 17108177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01684 35 206 Glycoside Hydrolase AT3G07070 49.339 5.25e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Vimu1g01684 Pkinase 7.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01684 - - gmx:100796595 280.026