Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01652 AACCGCCTCCCTCTGTCGAACTCACTCCTTAACCTAGGGTTGCGACTTTGGTGGCGGTCAGCTGGTTTGCTGCAGTTTGACGACACGAGTTTGGTGGTGCGGACGCTGACGGAGTGCTGCCACAGGGGTGGGGGTTATTGGGGGTTGGCGTGTCGAGGGCGTTGTAGGGAAGTGGTGTTAGTTTGGCGACTTGGTTTGGAATTGGGCTGCGAATGTTGTTGTCGGAGATGTCAAGGCAAAGAAGGAGGCAGAGGTTTTTGTGAAGGTCAAGGAAGCGGAGAGGAGAGATTCAGCAAAGTGATGATACAGGTGGGGTGCATCGAGCCCGTCATGGTCCTCTGTGTCGACAAGGAAAAGGGTTACATCGATATCAGAGAGCGTAGGGTCTACGAAGAGGATATTCAGGCTTGCGAGGAGAGATACAACAGGAGCAAGCTCGTCCACTCCATCATGCGCCAAATTGTTGAAATCCTCAACATCGATTTGGAGGAGCTCTATGTTCACATTGGAGGTCATGCTTTTGAGAACCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCATACTCATACAAGCGGTGACTATGACCAATTGGGAGATGATTTAACAGGTCATTATTTATCTTATAATGTTGTTGCTGCATAA 654 0.4939 NRLPLSNSLLNLGLRLWWRSAGLLQFDDTSLVVRTLTECCHRGGGYWGLACRGRCREVVLVWRLGLELGCECCCRRCQGKEGGRGFCEGQGSGEERFSKVMIQVGCIEPVMVLCVDKEKGYIDIRERRVYEEDIQACEERYNRSKLVHSIMRQIVEILNIDLEELYVHIGGHAFENPTCYSWNLLLELAFHTHTSGDYDQLGDDLTGHYLSYNVVAA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01652 217 Gene3D Translation initiation factor 2; subunit 1; domain 2 131 177 IPR024054 -
Vimu1g01652 217 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 101 185 IPR011488 GO:0003723|GO:0003743
Vimu1g01652 217 SUPERFAMILY eIF2alpha middle domain-like 129 170 IPR024054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01652 Vimu-Chr1 16216058 16217560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01652 101 175 Eukaryotic Initiation Factors Gene Family AT2G40290 70.732 3.36e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01652 K03237 - vra:106765684 176.022