Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01629 ATGGCCACCCCTACTAATCTTCCTTTTAACATCTGTTTCCTCCTTCTATTGCTTCTTCTACCACACTTTAATTTGGTTACACTAATTGTTCTTGCATCATATCATATATCATGTTATACATACAAAGGCAAAAGCCAACTTCAGCTGAATTACTACTCTAAAAGCTGTCCGAAAGCAGAGGACATCATCAAGCAACAAGTCACACAACTATATCATAAGCATGGAAACACTGCCGTCTCATGGGTTAGAAATCTCTTCCACGATTGCGTCGTTCAGGTCAGGACTTCATGCGACGCATCGCTACTTTTAGAGACGGCAAGCGACGGTACTTTAGTGTCGGAGCAGACATCGGAGAGAAGTATCGGTATGAGGAACTTTAAGTACGTAAACACCATCAAAGCCGCAGTTGAAGAAGAATGTCCCTTGACTGTGTCATGCGCTGACATTATTGCTCTTTCTGCTAGAGATGGCATTTCCTTGTTGGGTGGACCCAGCATTGAAATGAAGACAGGGCGAAAGGATAGCAAAGAAAGCTATGCAAAAGAGGTGGAAGACTTGATTCCAAACCACAATGATTCGATTTCCGTAGTGCTGTCTCGTTTTCAAGCCATTGGCATTGACGTTGAAGCCACAGTCGCTCTTTTAGGAGCTCACTCGGTAGGAAGAGTTCACTGCGTCAATCTTGTACATAGATTATATCCTACCGTGGACACAACACTTGATCCTGCACATGCTGAGTACCTGAAACGTCGATGTCCAACACCCAATCCTGATCCAAAGGCTGTCTTGTATTCAAGGAATGACCTGAAAACCCCCATGATCATTGACAACAACTACTACAAGAACATCTTGGAACATAAGGGCCTTCTCCTTGTTGATCAAGAACTTGCCACTGACTCAAGAACAGCACCTTACGTCCAAAACATGGCTAATGACAATCAATATTTTCACCACCAGTTCTCAAGGGCCATTCAATTGTTATCTGAGACCAATCCTCTATCAGGGGATCAAGGACAAATTAGAAAGGACTGTCGCTACCTCAATGTCGATTAA 1053 0.433 MATPTNLPFNICFLLLLLLLPHFNLVTLIVLASYHISCYTYKGKSQLQLNYYSKSCPKAEDIIKQQVTQLYHKHGNTAVSWVRNLFHDCVVQVRTSCDASLLLETASDGTLVSEQTSERSIGMRNFKYVNTIKAAVEEECPLTVSCADIIALSARDGISLLGGPSIEMKTGRKDSKESYAKEVEDLIPNHNDSISVVLSRFQAIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTVDTTLDPAHAEYLKRRCPTPNPDPKAVLYSRNDLKTPMIIDNNYYKNILEHKGLLLVDQELATDSRTAPYVQNMANDNQYFHHQFSRAIQLLSETNPLSGDQGQIRKDCRYLNVD 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01629 350 PRINTS Haem peroxidase superfamily signature 162 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 PRINTS Haem peroxidase superfamily signature 268 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 PRINTS Haem peroxidase superfamily signature 78 92 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 PRINTS Haem peroxidase superfamily signature 144 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 Gene3D Peroxidase, domain 2 189 328 - -
Vimu1g01629 350 PRINTS Plant peroxidase signature 80 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 PRINTS Plant peroxidase signature 124 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 PRINTS Plant peroxidase signature 282 299 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 PRINTS Plant peroxidase signature 56 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 PRINTS Plant peroxidase signature 162 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 PRINTS Plant peroxidase signature 209 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 PRINTS Plant peroxidase signature 322 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 PRINTS Plant peroxidase signature 143 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 PRINTS Plant peroxidase signature 266 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 PANTHER - 36 348 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 CDD secretory_peroxidase 46 345 IPR033905 GO:0004601|GO:0042744
Vimu1g01629 350 FunFam Peroxidase 188 327 - -
Vimu1g01629 350 Pfam Peroxidase 64 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 ProSiteProfiles Plant heme peroxidase family profile. 46 348 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 FunFam Peroxidase 50 197 - -
Vimu1g01629 350 SUPERFAMILY Heme-dependent peroxidases 46 348 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu1g01629 350 Gene3D - 50 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01629 Vimu-Chr1 15622907 15624341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01629 49 348 Peroxidase AT2G37130 73.754 5.63e-169 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01629 K00430 - gmx:100785485 549.666