Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01607 ATGGGAGAGGCAGAGAACATAGAAGTGGAAACAGAAGCAGAATCCGAAGCATCATCGTCCTGGAACCTCGGAAAACACACTCAGATAATCGAGCTGTCGGAGAAATTGTTGGACGGGAACCTTAGCGCCAAGATTGAGGCTGCAAGGGAGATAAGGAAGATGGTTCGAAAATCATCGTCCCCGTCGAAGATACGTGCGAAGCTCGCCGCAGCAGGTGTGATTGAACCCCTCGTGCTGATGCTGTCGTCTTCCAACATCGAAGCTCGCCAATCCTCTCTTCTCGCTCTCCTCAACCTCGCCGTTCGCAATGAACGTGTTACTGTGATTGGTGTTACTTTCCATGTTCACAAGGTAGTGGGAAAGGGATGGGTTCGTTGA 378 0.5079 MGEAENIEVETEAESEASSSWNLGKHTQIIELSEKLLDGNLSAKIEAAREIRKMVRKSSSPSKIRAKLAAAGVIEPLVLMLSSSNIEARQSSLLALLNLAVRNERVTVIGVTFHVHKVVGKGWVR 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01607 125 SUPERFAMILY ARM repeat 32 107 IPR016024 -
Vimu1g01607 125 MobiDBLite consensus disorder prediction 1 20 - -
Vimu1g01607 125 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 20 105 - -
Vimu1g01607 125 Gene3D - 21 113 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu1g01607 32 101 U-box Gene Family AT1G29340 38.571 6.74e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01607 K08332 - gmx:100782472 150.984